RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 FAM106CPP0CH98 169 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 LYZP61626 148 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 FAM106AQ4KMX7 169 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 OR9G4Q8NGQ1 327 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 PRSS3P2Q8NHM4 247 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 RPEQ96AT9 228 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 SPG11Q96JI7 2443 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
CCDC78-210ENST00000478979 RBP4P02753 201 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 KLRD1Q13241 179 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 SAMD5Q5TGI4 173 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
CCDC78-210ENST00000478979 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 VPS13CQ709C8 3753 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 HAX1O00165 279 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 CCL21O00585 134 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 CNIH1O95406 144 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 LTAP01374 205 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 CEACAM3P40198 252 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 MRGPRG-AS1Q2M3A8 158 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 KLF17Q5JT82 389 aaPredicted RBP11.17□□□□□ -0.62
CCDC78-210ENST00000478979 TSSC4Q9Y5U2 329 aaPredicted RBP11.17□□□□□ -0.62
CCDC78-210ENST00000478979 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
CCDC78-210ENST00000478979 ZNF207O43670 478 aaKnown RBP11.17□□□□□ -0.62
CCDC78-210ENST00000478979 COL8A1P27658 744 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 LOXL1Q08397 574 aaPredicted RBP11.17□□□□□ -0.62
CCDC78-210ENST00000478979 PCP2Q8IVA1 136 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 ATP6V0BQ99437 205 aa11.17□□□□□ -0.62
CCDC78-210ENST00000478979 TRAV8-1A0A0A6YYK1 113 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 IGHV1-3A0A0C4DH29 117 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 TNFRSF13BO14836 293 aaPredicted RBP11.16□□□□□ -0.62
CCDC78-210ENST00000478979 FCGR2BP31994 310 aaPredicted RBP11.16□□□□□ -0.62
CCDC78-210ENST00000478979 CACNG7P62955 275 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 TMEM30BQ3MIR4 351 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 OR4X2Q8NGF9 303 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 A0A096LNJ9 63 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 NBL1P41271 181 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 NMUP48645 174 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 HES1Q14469 280 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 FMC1Q96HJ9 113 aa11.16□□□□□ -0.62
CCDC78-210ENST00000478979 ATP5IP56385 69 aaPredicted RBP11.15□□□□□ -0.62
CCDC78-210ENST00000478979 CIARTQ8N365 385 aaPredicted RBP11.15□□□□□ -0.62
CCDC78-210ENST00000478979 SIGLEC9Q9Y336 463 aa11.15□□□□□ -0.62
CCDC78-210ENST00000478979 ARMS2P0C7Q2 107 aa11.15□□□□□ -0.62
CCDC78-210ENST00000478979 MC5RP33032 325 aa11.15□□□□□ -0.62
CCDC78-210ENST00000478979 IFI27P40305 119 aaPredicted RBP11.15□□□□□ -0.62
CCDC78-210ENST00000478979 PSG3Q16557 428 aa11.15□□□□□ -0.62
CCDC78-210ENST00000478979 TMEM189A5PLL7 270 aa11.15□□□□□ -0.63
CCDC78-210ENST00000478979 GAGE12HA6NDE8 117 aa11.15□□□□□ -0.63
CCDC78-210ENST00000478979 SIVA1O15304 175 aa11.15□□□□□ -0.63
CCDC78-210ENST00000478979 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.63
CCDC78-210ENST00000478979 RAXQ9Y2V3 346 aa11.15□□□□□ -0.63
CCDC78-210ENST00000478979 B9A039 149 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 BUB1B-PAK6H3BSN5 160 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 K7ENP7 123 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 TCRAP04437 139 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 FXYD7P58549 80 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
CCDC78-210ENST00000478979 LOC389332A0A1B0GUA5 103 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 A0A1B0GUT8 65 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 OVOL3O00110 214 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 TIMM23O14925 209 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 SMIM13P0DJ93 91 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 LGALS9BQ3B8N2 356 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 CD300EQ496F6 205 aaPredicted RBP11.14□□□□□ -0.63
CCDC78-210ENST00000478979 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
CCDC78-210ENST00000478979 COL25A1Q9BXS0 654 aaPredicted RBP11.14□□□□□ -0.63
CCDC78-210ENST00000478979 EXOC3-AS1Q8N2X6 119 aa11.13□□□□□ -0.63
CCDC78-210ENST00000478979 SRSF12Q8WXF0 261 aaKnown RBP11.13□□□□□ -0.63
CCDC78-210ENST00000478979 GCSHP23434 173 aa11.13□□□□□ -0.63
CCDC78-210ENST00000478979 RAB9AP51151 201 aa11.13□□□□□ -0.63
CCDC78-210ENST00000478979 LINC00311Q8N616 119 aa11.13□□□□□ -0.63
CCDC78-210ENST00000478979 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
CCDC78-210ENST00000478979 IGHV3OR16-8A0A075B7F1 116 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 K7ERJ3 54 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 IGHV3-23P01764 117 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 VKORC1Q9BQB6 163 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 Q9H3A6 140 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 IGLV1-47P01700 117 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 FXYD2P54710 66 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 CCDC144NLQ6NUI1 221 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 Q86TA4 180 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 KAAG1Q9UBP8 84 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 VGLL1Q99990 258 aa11.12□□□□□ -0.63
CCDC78-210ENST00000478979 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
CCDC78-210ENST00000478979 IGHV3-35A0A0C4DH35 117 aa11.11□□□□□ -0.63
CCDC78-210ENST00000478979 RIGQ13278 110 aa11.11□□□□□ -0.63
CCDC78-210ENST00000478979 ZNF414Q96IQ9 312 aa11.11□□□□□ -0.63
CCDC78-210ENST00000478979 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
CCDC78-210ENST00000478979 TPPP3Q9BW30 176 aa11.11□□□□□ -0.63
CCDC78-210ENST00000478979 SIGLEC8Q9NYZ4 499 aa11.11□□□□□ -0.63
CCDC78-210ENST00000478979 CKS1BP61024 79 aa11.1□□□□□ -0.63
CCDC78-210ENST00000478979 SCGB2A2Q13296 93 aa11.1□□□□□ -0.63
CCDC78-210ENST00000478979 BCL6BQ8N143 479 aaPredicted RBP11.1□□□□□ -0.63
CCDC78-210ENST00000478979 NDUFS7O75251 213 aa11.1□□□□□ -0.63
CCDC78-210ENST00000478979 WFDC2Q14508 124 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms