RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TMEM61Q8N0U2 210 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 FIZ1Q96SL8 496 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 A0A0U1RQV1 116 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 PRSS46E5RG02 174 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 INSL3P51460 131 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 C14orf144Q96I85 54 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 TEX37Q96LM6 180 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 FOXQ1Q9C009 403 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 ADAMTSL3P82987 1691 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 LINC00271P0C7V0 271 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 PSG4Q00888 419 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 NABP1Q96AH0 204 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 ZNF625Q96I27 306 aaPredicted RBP4.45□□□□□ -1.7
USF3-202ENST00000478658 IMMP1LQ96LU5 166 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 NDUFS6O75380 124 aaKnown RBP4.45□□□□□ -1.7
USF3-202ENST00000478658 VWA8A3KMH1 1905 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 IGHV3-13P01766 116 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 IGHV3-7P01780 117 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 CSRP2Q16527 193 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 C15orf32Q32M92 178 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 H0Y8X5 98 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 MUC7Q8TAX7 377 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 YPEL4Q96NS1 127 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 PTPRFP10586 1907 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 LDLRAD4O15165 306 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 FGF6P10767 208 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 CCL2P13500 99 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 DIRC1Q969H9 104 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 SHISA3A0PJX4 238 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 SPATA12Q7Z6I5 190 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 KLHDC9Q8NEP7 349 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 TIMM17AQ99595 171 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 LENEPQ9Y5L5 61 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 IGHV1-58A0A0C4DH39 117 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 SOCS1O15524 211 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 ASPHD1Q5U4P2 390 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 CAMK2N2Q96S95 79 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 RAMP1O60894 148 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 UBE2E1P51965 193 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 RFLNBQ8N5W9 214 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 PYGO2Q9BRQ0 406 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 ARID2Q68CP9 1835 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 LCNL1Q6ZST4 164 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 Q8N9L7 120 aa4.44□□□□□ -1.7
USF3-202ENST00000478658 SAA2-SAA4A0A096LPE2 208 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 SAA2P0DJI9 122 aaPredicted RBP4.43□□□□□ -1.7
USF3-202ENST00000478658 GATA1P15976 413 aaPredicted RBP4.43□□□□□ -1.7
USF3-202ENST00000478658 UBE2D3P61077 147 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 UBE2V1Q13404 147 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 FOXE3Q13461 319 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 ALKAL1Q6UXT8 129 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 CARD19Q96LW7 228 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 Q96M66 194 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 IGHV5-51A0A0C4DH38 117 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 IGLV3-27P01718 113 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 KIR3DS1Q14943 382 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 ADAMTSL5Q6ZMM2 481 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.43□□□□□ -1.7
USF3-202ENST00000478658 PRR14LQ5THK1 2151 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 SHISA8B8ZZ34 492 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 INSL4Q14641 139 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 TMEM254Q8TBM7 123 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 TM2D1Q9BX74 207 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 BRWD3Q6RI45 1802 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 A0A1B0GWJ7 208 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 K7ENP7 123 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 RPL15P61313 204 aaKnown RBP4.43□□□□□ -1.7
USF3-202ENST00000478658 C1QL4Q86Z23 238 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 CD59P13987 128 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 NDUFA4L2Q9NRX3 87 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 A0A1B0GW64 132 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 A6NED7 52 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 H3BMG7 143 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 DEFB130BP0DP73 79 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 DEFB130AP0DP74 79 aa4.43□□□□□ -1.7
USF3-202ENST00000478658 HMGA1P17096 107 aaKnown RBP4.42□□□□□ -1.7
USF3-202ENST00000478658 FAM222AQ5U5X8 452 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 C9orf62Q8N4C0 152 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 IGHV3-72A0A0B4J1Y9 119 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 ZG16O60844 167 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 CGAP01215 116 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 RSPO4Q2I0M5 234 aaPredicted RBP4.42□□□□□ -1.7
USF3-202ENST00000478658 Q8N1Y9 231 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 RNF183Q96D59 192 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 TCF20Q9UGU0 1960 aaKnown RBP4.42□□□□□ -1.7
USF3-202ENST00000478658 CSRP1P21291 193 aaKnown RBP4.42□□□□□ -1.7
USF3-202ENST00000478658 MUC21Q5SSG8 566 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 CARHSP1Q9Y2V2 147 aaKnown RBP4.42□□□□□ -1.7
USF3-202ENST00000478658 CRYGCP07315 174 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 C1orf100Q5SVJ3 147 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 CDPF1Q6NVV7 123 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 FOXI2Q6ZQN5 318 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 C20orf144Q9BQM9 153 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 AGMATQ9BSE5 352 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 SRXN1Q9BYN0 137 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 H7C423 109 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 HGFACQ04756 655 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 MRPL53Q96EL3 112 aaKnown RBP4.42□□□□□ -1.7
USF3-202ENST00000478658 KIAA1671Q9BY89 1806 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 FHL1Q13642 323 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms