RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GPHB5Q86YW7 130 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 BCL6BQ8N143 479 aaPredicted RBP6.12□□□□□ -1.43
VMA21-203ENST00000477649 GBGT1Q8N5D6 347 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 NUDT10Q8NFP7 164 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 OR4X2Q8NGF9 303 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 WFDC12Q8WWY7 111 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BHQ93079 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 NUDT11Q96G61 164 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 LINC00479Q96M42 142 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BNQ99877 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BMQ99879 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 ABCA2Q9BZC7 2435 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 RNASE7Q9H1E1 156 aaKnown RBP6.12□□□□□ -1.43
VMA21-203ENST00000477649 PPP1R14DQ9NXH3 145 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 PEF1Q9UBV8 284 aaKnown RBP6.12□□□□□ -1.43
VMA21-203ENST00000477649 PSG8Q9UQ74 426 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.11□□□□□ -1.434e-14■■■■■ 27.9
VMA21-203ENST00000477649 MED13LQ71F56 2210 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 PRRC2AP48634 2157 aaKnown RBP6.11□□□□□ -1.43
VMA21-203ENST00000477649 A0A1B0GW15 77 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 SLC17A3O00476 420 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 CD5LO43866 347 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 IGLV2-11P01706 119 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 FOXA3P55318 350 aaPredicted RBP6.11□□□□□ -1.43
VMA21-203ENST00000477649 RPS20P60866 119 aaKnown RBP6.11□□□□□ -1.43
VMA21-203ENST00000477649 SRSF2Q01130 221 aaKnown RBP6.11□□□□□ -1.43
VMA21-203ENST00000477649 FABP9Q0Z7S8 132 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 PRNTQ86SH4 94 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 FRZBQ92765 325 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 DAZ1Q9NQZ3 744 aaKnown RBP6.11□□□□□ -1.43
VMA21-203ENST00000477649 TMEM160Q9NX00 188 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 RPH3ALQ9UNE2 315 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 UFC1Q9Y3C8 167 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 SMAD5-AS1Q9Y6J3 95 aa6.11□□□□□ -1.43
VMA21-203ENST00000477649 DCHS2Q6V1P9 2916 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 ITPR2Q14571 2701 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 TRBV7-9A0A0J9YWB2 115 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 H3BTX0 84 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 CHEK1O14757 476 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 HOXA3O43365 443 aaPredicted RBP6.1□□□□□ -1.43
VMA21-203ENST00000477649 SMIM6P0DI80 62 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 S100A2P29034 98 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 NDUFA6P56556 154 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 LCN12Q6JVE5 192 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 MAPK1IP1LQ8NDC0 245 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 MYOZ3Q8TDC0 251 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 GLMPQ8WWB7 406 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 UBE2E2Q96LR5 201 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 C17orf77Q96MU5 243 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 NOL4LQ96MY1 436 aaPredicted RBP6.1□□□□□ -1.43
VMA21-203ENST00000477649 ZNF702PQ9H963 129 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 LINC00527Q9UJ94 153 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 LENEPQ9Y5L5 61 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 MYO9AB2RTY4 2548 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 NOTCH2Q04721 2471 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 SPG11Q96JI7 2443 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 CRYBG3Q68DQ2 2970 aa6.1□□□□□ -1.43
VMA21-203ENST00000477649 IGHV7-4-1A0A0J9YVY3 117 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 LGALS9O00182 355 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 SNRPCP09234 159 aaKnown RBP6.09□□□□□ -1.43
VMA21-203ENST00000477649 LGALS1P09382 135 aaKnown RBP6.09□□□□□ -1.43
VMA21-203ENST00000477649 AKR1D1P51857 326 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 SMUG1Q53HV7 270 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 FAM162BQ5T6X4 162 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 PRR27Q6MZM9 219 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 RBPMS2Q6ZRY4 209 aaKnown RBP6.09□□□□□ -1.43
VMA21-203ENST00000477649 REC114Q7Z4M0 266 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 WFDC11Q8NEX6 87 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 PRR25Q96S07 402 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 KLK15Q9H2R5 256 aa6.09□□□□□ -1.43
VMA21-203ENST00000477649 CELSR2Q9HCU4 2923 aa6.09□□□□□ -1.44
VMA21-203ENST00000477649 IGHV3-35A0A0C4DH35 117 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 HIGD1CA8MV81 97 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 A8MWP6 167 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 SNURFLB1AK76 121 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 M0R3E3 92 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 OVOL1O14753 267 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 ID1P41134 155 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 Q0VG73 95 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 RIGQ13278 110 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 DNLZQ5SXM8 178 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 HIST2H2BCQ6DN03 193 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 C9orf47Q6ZRZ4 202 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 C8orf86Q6ZUL3 223 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 SIGLECL1Q8N7X8 197 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 NHLRC2Q8NBF2 726 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 NUP35Q8NFH5 326 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 OR2D3Q8NGH3 330 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 BORCS7Q96B45 105 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 C16orf92Q96LL3 132 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 LINC00477Q96M19 166 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 PACRGQ96M98 296 aaPredicted RBP6.08□□□□□ -1.44
VMA21-203ENST00000477649 NEU1Q99519 415 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 ASCL2Q99929 193 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 MRPL18Q9H0U6 180 aaKnown RBP6.08□□□□□ -1.44
VMA21-203ENST00000477649 SMPXQ9UHP9 88 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 CENPEQ02224 2701 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 ABCA1O95477 2261 aa6.08□□□□□ -1.44
VMA21-203ENST00000477649 TRAV8-1A0A0A6YYK1 113 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms