RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 C8orf86Q6ZUL3 223 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 C4orf3Q8WVX3 66 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 VWFP04275 2813 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 IGHV3-35A0A0C4DH35 117 aa9.15□□□□□ -0.95
PRPF39-203ENST00000477626 NDUFA7O95182 113 aa9.15□□□□□ -0.95
PRPF39-203ENST00000477626 GALR1P47211 349 aa9.15□□□□□ -0.95
PRPF39-203ENST00000477626 GDF5OSQ5U4N7 250 aa9.15□□□□□ -0.95
PRPF39-203ENST00000477626 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.95
PRPF39-203ENST00000477626 NUDT11Q96G61 164 aa9.15□□□□□ -0.95
PRPF39-203ENST00000477626 IGHV4OR15-8A0A075B7B6 117 aa9.14□□□□□ -0.95
PRPF39-203ENST00000477626 A0A087WW49 117 aa9.14□□□□□ -0.95
PRPF39-203ENST00000477626 A8MTW9 85 aa9.14□□□□□ -0.95
PRPF39-203ENST00000477626 CDX1P47902 265 aaPredicted RBP9.14□□□□□ -0.95
PRPF39-203ENST00000477626 SLC25A5P05141 298 aaKnown RBP9.14□□□□□ -0.95
PRPF39-203ENST00000477626 C9orf47Q6ZRZ4 202 aa9.14□□□□□ -0.95
PRPF39-203ENST00000477626 OR4F17Q8NGA8 305 aa9.14□□□□□ -0.95
PRPF39-203ENST00000477626 COA6Q5JTJ3 125 aaKnown RBP9.14□□□□□ -0.95
PRPF39-203ENST00000477626 VGLL1Q99990 258 aa9.14□□□□□ -0.95
PRPF39-203ENST00000477626 SMPXQ9UHP9 88 aa9.14□□□□□ -0.95
PRPF39-203ENST00000477626 TMA7Q9Y2S6 64 aaKnown RBP9.14□□□□□ -0.95
PRPF39-203ENST00000477626 IGHV3-11P01762 117 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 ZNF80P51504 273 aaPredicted RBP9.13□□□□□ -0.95
PRPF39-203ENST00000477626 FLI1Q01543 452 aaPredicted RBP9.13□□□□□ -0.95
PRPF39-203ENST00000477626 C9orf152Q5JTZ5 239 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 UBE2CO00762 179 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BKO60814 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BJP06899 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BOP23527 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BBP33778 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 MEOX2P50222 304 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BDP58876 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BCP62807 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST2H2BEQ16778 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 TM4SF20Q53R12 229 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.13□□□□□ -0.95
PRPF39-203ENST00000477626 NHLRC2Q8NBF2 726 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BHQ93079 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 FAM210BQ96KR6 192 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BNQ99877 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 HIST1H2BMQ99879 126 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 TLN2Q9Y4G6 2542 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 FAM181BA6NEQ2 426 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 ZNF705FA8MVS1 300 aaPredicted RBP9.13□□□□□ -0.95
PRPF39-203ENST00000477626 LINC00310P59036 64 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 METTL26Q96S19 204 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
PRPF39-203ENST00000477626 NOTCH2Q04721 2471 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 PF4V1P10720 104 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 CNN1P51911 297 aaKnown RBP9.12□□□□□ -0.95
PRPF39-203ENST00000477626 LCN12Q6JVE5 192 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 C8orf49Q96NF6 230 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 GPR61Q9BZJ8 451 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 GFRA4Q9GZZ7 299 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 DAZ1Q9NQZ3 744 aaKnown RBP9.12□□□□□ -0.95
PRPF39-203ENST00000477626 FOSL1P15407 271 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 RNF182Q8N6D2 247 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 TP53TG3Q9ULZ0 132 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 PSG8Q9UQ74 426 aa9.12□□□□□ -0.95
PRPF39-203ENST00000477626 H7BYZ3 331 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 IGFL4Q6B9Z1 124 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 TCF24Q7RTU0 167 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 S100A7AQ86SG5 101 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 SLC50A1Q9BRV3 221 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 SCGB2A1O75556 95 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 BAGE2Q86Y30 109 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.11□□□□□ -0.95
PRPF39-203ENST00000477626 LINC01006Q8NI28 216 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 FRZBQ92765 325 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 PRR25Q96S07 402 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 PROK1P58294 105 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 FAM3BP58499 235 aaPredicted RBP9.11□□□□□ -0.95
PRPF39-203ENST00000477626 KLHDC1Q8N7A1 406 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 URGCP-MRPS24S4R325 110 aa9.11□□□□□ -0.95
PRPF39-203ENST00000477626 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
PRPF39-203ENST00000477626 FAM231BA6NCW3 169 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 FBLL1A6NHQ2 334 aaKnown RBP9.1□□□□□ -0.95
PRPF39-203ENST00000477626 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
PRPF39-203ENST00000477626 HNF1AP20823 631 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 IBA57Q5T440 356 aaKnown RBP9.1□□□□□ -0.95
PRPF39-203ENST00000477626 GRAMD2BQ96HH9 432 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 DUX5Q96PT3 197 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 IGHV3-66A0A0C4DH42 116 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 TRGC2P03986 189 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 TMEM136Q6ZRR5 245 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 TSKUQ8WUA8 353 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 ZNF207O43670 478 aaKnown RBP9.1□□□□□ -0.95
PRPF39-203ENST00000477626 PRR9Q5T870 116 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 ASCL2Q99929 193 aa9.1□□□□□ -0.95
PRPF39-203ENST00000477626 FBN1P35555 2871 aaKnown RBP9.1□□□□□ -0.95
PRPF39-203ENST00000477626 SONP18583 2426 aaKnown RBP9.09□□□□□ -0.95
PRPF39-203ENST00000477626 INAFM1C9JVW0 142 aa9.09□□□□□ -0.95
PRPF39-203ENST00000477626 CA1P00915 261 aaPredicted RBP9.09□□□□□ -0.95
PRPF39-203ENST00000477626 HOXD3P31249 432 aaPredicted RBP9.09□□□□□ -0.95
PRPF39-203ENST00000477626 NUP35Q8NFH5 326 aa9.09□□□□□ -0.95
PRPF39-203ENST00000477626 C11orf21Q9P2W6 132 aa9.09□□□□□ -0.95
PRPF39-203ENST00000477626 RASL11AQ6T310 242 aa9.09□□□□□ -0.95
PRPF39-203ENST00000477626 OR8I2Q8N0Y5 310 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms