RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 C12orf54Q6X4T0 127 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 Q8N6K4 173 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 MINOS1-NBL1R4GNA1 71 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 F8W735 103 aaPredicted RBP14.16□□□□□ -0.14
CCM2-209ENST00000477605 PTTG1IPP53801 180 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 KLF17Q5JT82 389 aaPredicted RBP14.16□□□□□ -0.14
CCM2-209ENST00000477605 UNQ5815/PRO19632Q6UWF5 114 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 DPF1Q92782 380 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 J3QKU1 62 aa14.15□□□□□ -0.14
CCM2-209ENST00000477605 CSN3P07498 182 aa14.15□□□□□ -0.14
CCM2-209ENST00000477605 SRSF2Q01130 221 aaKnown RBP14.15□□□□□ -0.14
CCM2-209ENST00000477605 FAM104BQ5XKR9 115 aa14.15□□□□□ -0.14
CCM2-209ENST00000477605 C8orf49Q96NF6 230 aa14.15□□□□□ -0.14
CCM2-209ENST00000477605 CBY1Q9Y3M2 126 aa14.15□□□□□ -0.14
CCM2-209ENST00000477605 SH2D1AO60880 128 aa14.14□□□□□ -0.15
CCM2-209ENST00000477605 BMI1P35226 326 aa14.14□□□□□ -0.15
CCM2-209ENST00000477605 LYZL1Q6UWQ5 148 aa14.14□□□□□ -0.15
CCM2-209ENST00000477605 ROS1P08922 2347 aa14.14□□□□□ -0.15
CCM2-209ENST00000477605 RELQ04864 619 aaPredicted RBP14.14□□□□□ -0.15
CCM2-209ENST00000477605 C11orf71Q6IPW1 123 aa14.13□□□□□ -0.15
CCM2-209ENST00000477605 PRR25Q96S07 402 aa14.13□□□□□ -0.15
CCM2-209ENST00000477605 CCL25O15444 150 aa14.13□□□□□ -0.15
CCM2-209ENST00000477605 KLRD1Q13241 179 aa14.13□□□□□ -0.15
CCM2-209ENST00000477605 ORMDL3Q8N138 153 aa14.13□□□□□ -0.15
CCM2-209ENST00000477605 TPPP3Q9BW30 176 aa14.13□□□□□ -0.15
CCM2-209ENST00000477605 RABAC1Q9UI14 185 aa14.13□□□□□ -0.15
CCM2-209ENST00000477605 CCL21O00585 134 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 GRNP28799 593 aaKnown RBP14.12□□□□□ -0.15
CCM2-209ENST00000477605 HIST1H1AQ02539 215 aaPredicted RBP14.12□□□□□ -0.15
CCM2-209ENST00000477605 KLRB1Q12918 225 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 KLK9Q2XQG4 91 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 MPV17L2Q567V2 206 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 BVES-AS1Q5T3Y7 98 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 VMO1Q7Z5L0 202 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 PRELID3AQ96N28 172 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 KLK9Q9UKQ9 250 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 PKDREJQ9NTG1 2253 aa14.12□□□□□ -0.15
CCM2-209ENST00000477605 RAB9AP51151 201 aa14.11□□□□□ -0.15
CCM2-209ENST00000477605 BCL6BQ8N143 479 aaPredicted RBP14.11□□□□□ -0.15
CCM2-209ENST00000477605 NBASA2RRP1 2371 aa14.11□□□□□ -0.15
CCM2-209ENST00000477605 NCBP2LA6PVI3 153 aaKnown RBP14.11□□□□□ -0.15
CCM2-209ENST00000477605 NUDT3O95989 172 aa14.11□□□□□ -0.15
CCM2-209ENST00000477605 CTSGP08311 255 aa14.11□□□□□ -0.15
CCM2-209ENST00000477605 COX8AP10176 69 aa14.11□□□□□ -0.15
CCM2-209ENST00000477605 NPFFR1Q9GZQ6 430 aa14.11□□□□□ -0.15
CCM2-209ENST00000477605 S4R3C0 116 aa14.11□□□□□ -0.15
CCM2-209ENST00000477605 IGHV2-70DA0A0C4DH43 119 aa14.1□□□□□ -0.15
CCM2-209ENST00000477605 D6R8Y8 96 aa14.1□□□□□ -0.15
CCM2-209ENST00000477605 NDPQ00604 133 aa14.1□□□□□ -0.15
CCM2-209ENST00000477605 DEFB125Q8N687 156 aa14.1□□□□□ -0.15
CCM2-209ENST00000477605 ASCL2Q99929 193 aa14.1□□□□□ -0.15
CCM2-209ENST00000477605 SIGLEC8Q9NYZ4 499 aa14.1□□□□□ -0.15
CCM2-209ENST00000477605 IFI27P40305 119 aaPredicted RBP14.1□□□□□ -0.15
CCM2-209ENST00000477605 TENM4Q6N022 2769 aa14.09□□□□□ -0.15
CCM2-209ENST00000477605 LGALS9BQ3B8N2 356 aa14.09□□□□□ -0.15
CCM2-209ENST00000477605 FBLN7Q53RD9 439 aa14.09□□□□□ -0.15
CCM2-209ENST00000477605 LGALS9CQ6DKI2 356 aa14.09□□□□□ -0.15
CCM2-209ENST00000477605 OR1N2Q8NGR9 330 aa14.09□□□□□ -0.15
CCM2-209ENST00000477605 IGKV2-40A0A087WW87 121 aaPredicted RBP14.08□□□□□ -0.15
CCM2-209ENST00000477605 TMEM213A2RRL7 107 aa14.08□□□□□ -0.15
CCM2-209ENST00000477605 K7EP13 123 aa14.08□□□□□ -0.15
CCM2-209ENST00000477605 LY6HO94772 140 aa14.08□□□□□ -0.15
CCM2-209ENST00000477605 IGKV2D-40P01614 121 aaPredicted RBP14.08□□□□□ -0.15
CCM2-209ENST00000477605 IGLC6P0CF74 106 aa14.08□□□□□ -0.15
CCM2-209ENST00000477605 TMEM11P17152 192 aa14.08□□□□□ -0.15
CCM2-209ENST00000477605 MRPL51Q4U2R6 128 aaKnown RBP14.08□□□□□ -0.15
CCM2-209ENST00000477605 FER1L6-AS1Q8NA97 138 aa14.08□□□□□ -0.15
CCM2-209ENST00000477605 A0A096LNJ9 63 aa14.08□□□□□ -0.16
CCM2-209ENST00000477605 EGR2P11161 476 aaPredicted RBP14.08□□□□□ -0.16
CCM2-209ENST00000477605 AMN1Q8IY45 258 aa14.08□□□□□ -0.16
CCM2-209ENST00000477605 SMAD5-AS1Q9Y6J3 95 aa14.08□□□□□ -0.16
CCM2-209ENST00000477605 A0A087X0K7 114 aa14.07□□□□□ -0.16
CCM2-209ENST00000477605 IGHV7-81A0A0B4J1V7 117 aa14.07□□□□□ -0.16
CCM2-209ENST00000477605 OR2T8A6NH00 312 aa14.07□□□□□ -0.16
CCM2-209ENST00000477605 CD5LO43866 347 aa14.07□□□□□ -0.16
CCM2-209ENST00000477605 FAM106CPP0CH98 169 aa14.07□□□□□ -0.16
CCM2-209ENST00000477605 DYNAPQ8N1N2 210 aa14.07□□□□□ -0.16
CCM2-209ENST00000477605 FAM110DQ8TAY7 271 aaPredicted RBP14.07□□□□□ -0.16
CCM2-209ENST00000477605 RELNP78509 3460 aa14.07□□□□□ -0.16
CCM2-209ENST00000477605 RBAKDNA6NC62 111 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 H0Y8G0 127 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 TAX1BP3O14907 124 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 PPBPP02775 128 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 GPR183P32249 361 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 RHOGP84095 191 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 DTX2Q86UW9 622 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 CNFNQ9BYD5 112 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 MYO18BQ8IUG5 2567 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 TMSB15BA0A087X1C1 80 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 A0A1W2PRD5 423 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 A0A1W2PRF3 423 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 A0A1W2PRM7 423 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 HBDP02042 147 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 ADORA2A-AS1P86434 159 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 PAX8Q06710 450 aa14.06□□□□□ -0.16
CCM2-209ENST00000477605 FABP5P3A8MUU1 101 aa14.05□□□□□ -0.16
CCM2-209ENST00000477605 IGHG4P01861 327 aa14.05□□□□□ -0.16
CCM2-209ENST00000477605 PSMG4Q5JS54 123 aa14.05□□□□□ -0.16
CCM2-209ENST00000477605 Q8N9W7 124 aa14.05□□□□□ -0.16
CCM2-209ENST00000477605 MCRIP2Q9BUT9 160 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms