RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 KIR2DL5BA0A0G2JN68 375 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 KIR2DL5BA0A0G2JPC4 375 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 NMBP08949 121 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 ATF4P18848 351 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-209ENST00000477554 GCHFRP30047 84 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 IQCF2Q8IXL9 164 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 KIR2DL5AQ8N109 375 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 KIR2DL5BQ8NHK3 375 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 LYPD6BQ8NI32 183 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 ZNF503Q96F45 646 aa12.9□□□□□ -0.34
PTPN7-209ENST00000477554 MRPS12O15235 138 aaKnown RBP12.89□□□□□ -0.35
PTPN7-209ENST00000477554 PYYP10082 97 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 HIST1H1EP10412 219 aaKnown RBP12.89□□□□□ -0.35
PTPN7-209ENST00000477554 PSMB3P49720 205 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 MEOX2P50222 304 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 PPT1P50897 306 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 UBE2L3P68036 154 aaKnown RBP12.89□□□□□ -0.35
PTPN7-209ENST00000477554 GUK1Q16774 197 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 ACTL10Q5JWF8 245 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 CLLU1Q5K131 121 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
PTPN7-209ENST00000477554 HRH4Q9H3N8 390 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 ALMS1Q8TCU4 4167 aa12.89□□□□□ -0.35
PTPN7-209ENST00000477554 A0A1B0GV50 99 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 SOCS3O14543 225 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 CA1P00915 261 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-209ENST00000477554 OR10J4P0C629 311 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 NBEAP1P0C6P0 100 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 IGLC2P0DOY2 106 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 PRB4P10163 310 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-209ENST00000477554 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 NRN1Q9NPD7 142 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 A0A087X0K7 114 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 DEFB4AO15263 64 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 PCNPQ8WW12 178 aaKnown RBP12.88□□□□□ -0.35
PTPN7-209ENST00000477554 C20orf173Q96LM9 149 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 CLEC5AQ9NY25 188 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 TP53TG1Q9Y2A0 90 aa12.88□□□□□ -0.35
PTPN7-209ENST00000477554 UBE2CO00762 179 aa12.87□□□□□ -0.35
PTPN7-209ENST00000477554 CMC4P56277 68 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-209ENST00000477554 PMS2P11Q13670 270 aa12.87□□□□□ -0.35
PTPN7-209ENST00000477554 PDE6HQ13956 83 aa12.87□□□□□ -0.35
PTPN7-209ENST00000477554 STHQ8IWL8 128 aa12.87□□□□□ -0.35
PTPN7-209ENST00000477554 TMPRSS5Q9H3S3 457 aa12.87□□□□□ -0.35
PTPN7-209ENST00000477554 TRBV19A0A075B6N1 114 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 ZNF253O75346 499 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 IFNA1P01562 189 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 SAMD13Q5VXD3 122 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 IGFL4Q6B9Z1 124 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 IL17DQ8TAD2 202 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 BLNKQ8WV28 456 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 ZNF586Q9NXT0 402 aa12.86□□□□□ -0.35
PTPN7-209ENST00000477554 F6UB75 175 aa12.85□□□□□ -0.35
PTPN7-209ENST00000477554 H3BQ15 152 aa12.85□□□□□ -0.35
PTPN7-209ENST00000477554 CCL20P78556 96 aa12.85□□□□□ -0.35
PTPN7-209ENST00000477554 ARL2-SNX15V9GYD0 113 aa12.85□□□□□ -0.35
PTPN7-209ENST00000477554 TAGLN2P37802 199 aaKnown RBP12.84□□□□□ -0.35
PTPN7-209ENST00000477554 PSG9Q00887 426 aa12.84□□□□□ -0.35
PTPN7-209ENST00000477554 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.84□□□□□ -0.35
PTPN7-209ENST00000477554 LYPD1Q8N2G4 141 aa12.84□□□□□ -0.35
PTPN7-209ENST00000477554 OR11H2Q8NH07 326 aa12.84□□□□□ -0.35
PTPN7-209ENST00000477554 LINC00052Q96N35 136 aa12.84□□□□□ -0.35
PTPN7-209ENST00000477554 SLC50A1Q9BRV3 221 aa12.84□□□□□ -0.35
PTPN7-209ENST00000477554 A0A1W2PRE2 83 aa12.83□□□□□ -0.36
PTPN7-209ENST00000477554 IGKV3-20P01619 116 aa12.83□□□□□ -0.36
PTPN7-209ENST00000477554 SNRPCP09234 159 aaKnown RBP12.83□□□□□ -0.36
PTPN7-209ENST00000477554 RARRES2Q99969 163 aa12.83□□□□□ -0.36
PTPN7-209ENST00000477554 NKX6-2Q9C056 277 aaPredicted RBP12.83□□□□□ -0.36
PTPN7-209ENST00000477554 GNG13Q9P2W3 67 aa12.83□□□□□ -0.36
PTPN7-209ENST00000477554 H3BMM0 161 aa12.82□□□□□ -0.36
PTPN7-209ENST00000477554 H3BTX0 84 aa12.82□□□□□ -0.36
PTPN7-209ENST00000477554 FXYD7P58549 80 aa12.82□□□□□ -0.36
PTPN7-209ENST00000477554 CSNK1G2-AS1Q8NCQ2 148 aa12.82□□□□□ -0.36
PTPN7-209ENST00000477554 C16orf92Q96LL3 132 aa12.82□□□□□ -0.36
PTPN7-209ENST00000477554 AAMDCQ9H7C9 122 aa12.82□□□□□ -0.36
PTPN7-209ENST00000477554 TRAV8-2A0A0B4J237 113 aa12.81□□□□□ -0.36
PTPN7-209ENST00000477554 NDUFB4O95168 129 aa12.81□□□□□ -0.36
PTPN7-209ENST00000477554 ID1P41134 155 aa12.81□□□□□ -0.36
PTPN7-209ENST00000477554 UBE2G2P60604 165 aa12.81□□□□□ -0.36
PTPN7-209ENST00000477554 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
PTPN7-209ENST00000477554 TXNDC17Q9BRA2 123 aa12.81□□□□□ -0.36
PTPN7-209ENST00000477554 ZNF331Q9NQX6 463 aaPredicted RBP12.81□□□□□ -0.36
PTPN7-209ENST00000477554 FAM74A7A6NL05 159 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 SLC17A3O00476 420 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 ISLRO14498 428 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 PAGE4O60829 102 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 HLA-DMBP28068 263 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 SNRPD3P62318 126 aaKnown RBP12.8□□□□□ -0.36
PTPN7-209ENST00000477554 CST9LP1Q5W188 147 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 RNF182Q8N6D2 247 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 FAM210AQ96ND0 272 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 Q9H3A6 140 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 X6R8D5 127 aa12.8□□□□□ -0.36
PTPN7-209ENST00000477554 RBFOX3A6NFN3 312 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 RBMY1A1P0DJD3 496 aaKnown RBP12.79□□□□□ -0.36
PTPN7-209ENST00000477554 RBMY1CP0DJD4 496 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 BCL2P10415 239 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms