RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 A0A0J9YWU9 116 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 CTXND1A0A1B0GTU2 59 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 STAG3L2P0CL84 134 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 STAG3L3P0CL85 134 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 HIST1H1EP10412 219 aaKnown RBP8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 SULT1A2P50226 295 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 GDF5OSQ5U4N7 250 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 FAM122CQ6P4D5 195 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 ZNF705AQ6ZN79 300 aaPredicted RBP8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 TMED6Q8WW62 240 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 RAB24Q969Q5 203 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 SAT2Q96F10 170 aaPredicted RBP8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 C20orf173Q96LM9 149 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 SLC25A2Q9BXI2 301 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 PRELID1Q9Y255 219 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 BOLA1Q9Y3E2 137 aa8.99□□□□□ -0.97
CLCNKA-205ENST00000477360 TRAV5A0A0B4J249 113 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 ZNF705FA8MVS1 300 aaPredicted RBP8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 ZNF705DP0CH99 300 aaPredicted RBP8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 ZNF705BP0CI00 300 aaPredicted RBP8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 ZNF726P1Q15940 193 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 AMTNQ6UX39 209 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 Q8NAQ8 132 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 ZNF738Q8NE65 137 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 OR8A1Q8NGG7 326 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 SUN5Q8TC36 379 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 ZNF503Q96F45 646 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 OR51M1Q9H341 326 aa8.98□□□□□ -0.97
CLCNKA-205ENST00000477360 TRBV19A0A075B6N1 114 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 TMEM189A5PLL7 270 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 NUPR2A6NF83 97 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 CNN1P51911 297 aaKnown RBP8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 OR4B1Q8NGF8 309 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 MBD3L1Q8WWY6 194 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 IGF2BP2-AS1Q96M15 143 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 ODF3Q96PU9 254 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 PAXXQ9BUH6 204 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 GOLT1BQ9Y3E0 138 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 X6R8D5 127 aa8.97□□□□□ -0.97
CLCNKA-205ENST00000477360 H3BQ15 152 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 OR7C2O60412 319 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 CXorf1O96002 111 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 SSX7Q7RTT5 188 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 LYPD1Q8N2G4 141 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 RNF141Q8WVD5 230 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 FXYD5Q96DB9 178 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 ZNF586Q9NXT0 402 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 AGRNO00468 2067 aa8.96□□□□□ -0.98
CLCNKA-205ENST00000477360 CSMD3Q7Z407 3707 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 TRAV1-1A0A0B4J248 108 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 TEX48A0A1B0GUV7 120 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 NBEAP1P0C6P0 100 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 PYYP10082 97 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 TMEM256Q8N2U0 113 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 RNF182Q8N6D2 247 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 ARL6IP6Q8N6S5 226 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 XCL2Q9UBD3 114 aa8.95□□□□□ -0.98
CLCNKA-205ENST00000477360 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 MAP1LC3B2A6NCE7 125 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 F6UB75 175 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 NDUFB4O95168 129 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 ARL14EPLP0DKL9 152 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 TSPOP30536 169 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 FHITP49789 147 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 TCTAP57738 103 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 TEX261Q6UWH6 196 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 ALKAL2Q6UX46 152 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 OR10J6PQ8NGY7 276 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 C11orf45Q8TAV5 145 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 FAM213BQ8TBF2 198 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 MAP1LC3BQ9GZQ8 125 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 SLC35B3Q9H1N7 401 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 AAMDCQ9H7C9 122 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 TMEM167BQ9NRX6 74 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 ARL2-SNX15V9GYD0 113 aa8.94□□□□□ -0.98
CLCNKA-205ENST00000477360 TRBV7-9A0A0J9YWB2 115 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 C11orf94C9JXX5 98 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 SLC17A3O00476 420 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 INSP01308 110 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 NMBP08949 121 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 H2AFB1P0C5Y9 115 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 GCHFRP30047 84 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 CDKN1BP46527 198 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 DEFB1P60022 68 aa8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 CEMP1Q6PRD7 247 aaPredicted RBP8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 KLK5Q9Y337 293 aaPredicted RBP8.93□□□□□ -0.98
CLCNKA-205ENST00000477360 KMT2CQ8NEZ4 4911 aaKnown RBP8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 NPIPB6E9PJ23 425 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 HMGB3O15347 200 aaKnown RBP8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 IGKV3-20P01619 116 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 HBE1P02100 147 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 OR10J4P0C629 311 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 RBMY1A1P0DJD3 496 aaKnown RBP8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 RBMY1CP0DJD4 496 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 BLOC1S1P78537 153 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 HIST1H1AQ02539 215 aaPredicted RBP8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 PMS2P11Q13670 270 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms