RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 H0YIZ8 118 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 P0DMU3 169 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 FAM231AP0DMU4 169 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 FAM231CP0DMU5 169 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 DEFB130BP0DP73 79 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 DEFB130AP0DP74 79 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 DEFA1P59665 94 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 DEFA3P59666 94 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 KIR3DS1Q14943 382 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 FCN2Q15485 313 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 CHAC2Q8WUX2 184 aa15.17■□□□□ 0.02
LIMK1-204ENST00000476792 J3KRW8 73 aa15.16■□□□□ 0.02
LIMK1-204ENST00000476792 SSNA1O43805 119 aa15.16■□□□□ 0.02
LIMK1-204ENST00000476792 CYCSP99999 105 aaKnown RBP15.16■□□□□ 0.02
LIMK1-204ENST00000476792 GUK1Q16774 197 aa15.16■□□□□ 0.02
LIMK1-204ENST00000476792 TMEM256Q8N2U0 113 aa15.16■□□□□ 0.02
LIMK1-204ENST00000476792 POM121L12Q8N7R1 296 aa15.16■□□□□ 0.02
LIMK1-204ENST00000476792 MARVELD1Q9BSK0 173 aa15.16■□□□□ 0.02
LIMK1-204ENST00000476792 KMT2AQ03164 3969 aa15.16■□□□□ 0.02
LIMK1-204ENST00000476792 MPDU1O75352 247 aa15.15■□□□□ 0.02
LIMK1-204ENST00000476792 H2BFSP57053 126 aa15.15■□□□□ 0.02
LIMK1-204ENST00000476792 TAS2R60P59551 318 aa15.15■□□□□ 0.02
LIMK1-204ENST00000476792 LYRM9A8MSI8 78 aa15.14■□□□□ 0.01
LIMK1-204ENST00000476792 PYYP10082 97 aa15.14■□□□□ 0.01
LIMK1-204ENST00000476792 TSPOP30536 169 aa15.14■□□□□ 0.01
LIMK1-204ENST00000476792 TMEM88Q6PEY1 159 aa15.14■□□□□ 0.01
LIMK1-204ENST00000476792 UBE2DNLQ8IWF7 75 aa15.14■□□□□ 0.01
LIMK1-204ENST00000476792 BLNKQ8WV28 456 aa15.14■□□□□ 0.01
LIMK1-204ENST00000476792 FAM210BQ96KR6 192 aa15.14■□□□□ 0.01
LIMK1-204ENST00000476792 TIMM9Q9Y5J7 89 aa15.14■□□□□ 0.01
LIMK1-204ENST00000476792 VPS13DQ5THJ4 4388 aa15.13■□□□□ 0.01
LIMK1-204ENST00000476792 TRBV19A0A075B6N1 114 aa15.13■□□□□ 0.01
LIMK1-204ENST00000476792 PLAC8L1A1L4L8 177 aa15.13■□□□□ 0.01
LIMK1-204ENST00000476792 PPP1R1CQ8WVI7 109 aa15.13■□□□□ 0.01
LIMK1-204ENST00000476792 TMEM14CQ9P0S9 112 aa15.13■□□□□ 0.01
LIMK1-204ENST00000476792 M0R2N4 97 aa15.12■□□□□ 0.01
LIMK1-204ENST00000476792 M0R3E3 92 aa15.12■□□□□ 0.01
LIMK1-204ENST00000476792 CT45A10P0DMU9 189 aa15.12■□□□□ 0.01
LIMK1-204ENST00000476792 HIST1H1EP10412 219 aaKnown RBP15.12■□□□□ 0.01
LIMK1-204ENST00000476792 GFI1BQ5VTD9 330 aa15.12■□□□□ 0.01
LIMK1-204ENST00000476792 MIR17HGQ75NE6 70 aa15.12■□□□□ 0.01
LIMK1-204ENST00000476792 H7BYZ3 331 aa15.11■□□□□ 0.01
LIMK1-204ENST00000476792 ZNF253O75346 499 aa15.11■□□□□ 0.01
LIMK1-204ENST00000476792 C16orf74Q96GX8 76 aa15.11■□□□□ 0.01
LIMK1-204ENST00000476792 SLC25A2Q9BXI2 301 aa15.11■□□□□ 0.01
LIMK1-204ENST00000476792 WDR61Q9GZS3 305 aaKnown RBP15.11■□□□□ 0.01
LIMK1-204ENST00000476792 NPIPB6E9PJ23 425 aa15.1■□□□□ 0.01
LIMK1-204ENST00000476792 F5H768 121 aa15.1■□□□□ 0.01
LIMK1-204ENST00000476792 NDUFB4O95168 129 aa15.1■□□□□ 0.01
LIMK1-204ENST00000476792 LEPP41159 167 aa15.1■□□□□ 0.01
LIMK1-204ENST00000476792 ERCC8Q13216 396 aa15.1■□□□□ 0.01
LIMK1-204ENST00000476792 EXOC3-AS1Q8N2X6 119 aa15.1■□□□□ 0.01
LIMK1-204ENST00000476792 NOP10Q9NPE3 64 aaKnown RBP15.1■□□□□ 0.01
LIMK1-204ENST00000476792 BATF3Q9NR55 127 aa15.1■□□□□ 0.01
LIMK1-204ENST00000476792 TRAV12-3A0A0B4J271 114 aa15.09■□□□□ 0.01
LIMK1-204ENST00000476792 C20orf144Q9BQM9 153 aa15.09■□□□□ 0.01
LIMK1-204ENST00000476792 SMIM3Q9BZL3 60 aa15.09■□□□□ 0.01
LIMK1-204ENST00000476792 TIMM8BQ9Y5J9 83 aaPredicted RBP15.09■□□□□ 0.01
LIMK1-204ENST00000476792 MPC2O95563 127 aa15.08■□□□□ 0
LIMK1-204ENST00000476792 ZNF493Q6ZR52 646 aa15.08■□□□□ 0
LIMK1-204ENST00000476792 CCDC28AQ8IWP9 274 aa15.08■□□□□ 0
LIMK1-204ENST00000476792 RNASE8Q8TDE3 154 aaKnown RBP15.08■□□□□ 0
LIMK1-204ENST00000476792 TMEM263Q8WUH6 116 aaKnown RBP15.08■□□□□ 0
LIMK1-204ENST00000476792 FAM167A-AS1Q96KT0 104 aa15.08■□□□□ 0
LIMK1-204ENST00000476792 ATP5SQ99766 215 aa15.08■□□□□ 0
LIMK1-204ENST00000476792 AAMDCQ9H7C9 122 aa15.08■□□□□ 0
LIMK1-204ENST00000476792 KCNIP2Q9NS61 270 aa15.08■□□□□ 0
LIMK1-204ENST00000476792 IGLV2-18A0A075B6J9 118 aa15.07■□□□□ 0
LIMK1-204ENST00000476792 C17orf112F2Z3M2 114 aa15.07■□□□□ 0
LIMK1-204ENST00000476792 ICAM4Q14773 271 aa15.07■□□□□ 0
LIMK1-204ENST00000476792 MRPL53Q96EL3 112 aaKnown RBP15.07■□□□□ 0
LIMK1-204ENST00000476792 ODF3Q96PU9 254 aa15.07■□□□□ 0
LIMK1-204ENST00000476792 OR51M1Q9H341 326 aa15.07■□□□□ 0
LIMK1-204ENST00000476792 MBD2Q9UBB5 411 aa15.07■□□□□ 0
LIMK1-204ENST00000476792 PRELID1Q9Y255 219 aa15.07■□□□□ 0
LIMK1-204ENST00000476792 HSPB11Q9Y547 144 aa15.07■□□□□ 0
LIMK1-204ENST00000476792 ATP5G1P05496 136 aa15.06■□□□□ 0
LIMK1-204ENST00000476792 OR10J4P0C629 311 aa15.06■□□□□ 0
LIMK1-204ENST00000476792 PET100P0DJ07 73 aa15.06■□□□□ 0
LIMK1-204ENST00000476792 ATP5G3P48201 142 aa15.06■□□□□ 0
LIMK1-204ENST00000476792 PDE6HQ13956 83 aa15.06■□□□□ 0
LIMK1-204ENST00000476792 FAM122CQ6P4D5 195 aa15.06■□□□□ 0
LIMK1-204ENST00000476792 PAXXQ9BUH6 204 aa15.06■□□□□ 0
LIMK1-204ENST00000476792 AGPAT4-IT1Q9H0P7 198 aa15.06■□□□□ 0
LIMK1-204ENST00000476792 CBY3A6NI87 242 aa15.05■□□□□ -0
LIMK1-204ENST00000476792 NBEAP1P0C6P0 100 aa15.05■□□□□ -0
LIMK1-204ENST00000476792 RPL12P30050 165 aaKnown RBP15.05■□□□□ -0
LIMK1-204ENST00000476792 SCGB1C1Q8TD33 95 aa15.05■□□□□ -0
LIMK1-204ENST00000476792 MRPL32Q9BYC8 188 aaKnown RBP15.05■□□□□ -0
LIMK1-204ENST00000476792 FUT9Q9Y231 359 aa15.05■□□□□ -0
LIMK1-204ENST00000476792 IGKV2-40A0A087WW87 121 aaPredicted RBP15.04■□□□□ -0
LIMK1-204ENST00000476792 NUDT3O95989 172 aa15.04■□□□□ -0
LIMK1-204ENST00000476792 IFNA5P01569 189 aa15.04■□□□□ -0
LIMK1-204ENST00000476792 IGKV2D-40P01614 121 aaPredicted RBP15.04■□□□□ -0
LIMK1-204ENST00000476792 FFAR4Q5NUL3 377 aa15.04■□□□□ -0
LIMK1-204ENST00000476792 C15orf53Q8NAA6 179 aa15.04■□□□□ -0
LIMK1-204ENST00000476792 DNAH10Q8IVF4 4471 aa15.04■□□□□ -0
LIMK1-204ENST00000476792 OR7C2O60412 319 aa15.03■□□□□ -0
LIMK1-204ENST00000476792 RNASE4P34096 147 aaKnown RBP15.03■□□□□ -0
LIMK1-204ENST00000476792 RNF141Q8WVD5 230 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms