RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 C4orf45Q96LM5 186 aa4.53□□□□□ -1.68
SPTLC3-205ENST00000476791 PLXNB3Q9ULL4 1909 aa4.53□□□□□ -1.68
SPTLC3-205ENST00000476791 TANC2Q9HCD6 1990 aa4.53□□□□□ -1.68
SPTLC3-205ENST00000476791 COL11A2P13942 1736 aaPredicted RBP4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 KLLNB2CW77 178 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 NDUFS7O75251 213 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 CST7O76096 145 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 CCL23P55773 120 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 ZNF791Q3KP31 576 aaPredicted RBP4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 TMEM155Q4W5P6 130 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 RNF185Q96GF1 192 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 GNG13Q9P2W3 67 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 PCDH15Q96QU1 1955 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 IGHV1OR15-9A0A0B4J2B8 117 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 ZFP92A6NM28 416 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 H0Y9J4 135 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 ATOX1O00244 68 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 FRMD6-AS1P0C7T7 363 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 SCGB1C2P0DMR2 95 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 CXCL5P42830 114 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 Q6ZS49 121 aa4.52□□□□□ -1.69
SPTLC3-205ENST00000476791 TRBV20OR9-2A0A075B6H5 130 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 LOC100131303A0A0U1RQF7 123 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 LINC01553A4QN01 128 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 CCL16O15467 120 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 SSSCA1O60232 199 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 FSTL3O95633 263 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 LINC00173Q6ZV60 143 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 LRRK1Q38SD2 2015 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 LGALS3P17931 250 aaKnown RBP4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 HIST1H4AP62805 103 aaKnown RBP4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 MAPKAPK5-AS1Q8N8E1 139 aa4.51□□□□□ -1.69
SPTLC3-205ENST00000476791 TRBV27A0A0K0K1C4 114 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 RNASE2P10153 161 aaKnown RBP4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 PSMB2P49721 201 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 CCL8P80075 99 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 MORN5Q5VZ52 161 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 GFRALQ6UXV0 394 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 ZFP2Q6ZN57 461 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 Q6ZVQ6 151 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 ZNF584Q8IVC4 421 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 FAM223AQ8IWN6 122 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 H1FXQ92522 213 aaKnown RBP4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 ZNF706Q9Y5V0 76 aaPredicted RBP4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 TJP1Q07157 1748 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 NYNRINQ9P2P1 1898 aaKnown RBP4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 A0A087WZ39 114 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 LYPD5Q6UWN5 251 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 OR5AS1Q8N127 324 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 TMEM252Q8N6L7 170 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 SERP2Q8N6R1 65 aa4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 TAF15Q92804 592 aaKnown RBP eCLIP4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 HDHD3Q9BSH5 251 aaPredicted RBP4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 HEATR1Q9H583 2144 aaKnown RBP4.5□□□□□ -1.69
SPTLC3-205ENST00000476791 H3BVH4 76 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 SMIM22K7EJ46 135 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 COX7A2LO14548 114 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 LTAP01374 205 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 RIGQ13278 110 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 LCA10Q71F78 164 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 RPS27LQ71UM5 84 aaKnown RBP4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 ZNF747Q9BV97 191 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 Q9HAA7 133 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 IGKV1-9A0A0C4DH69 117 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 UBE2L5PA0A1B0GUS4 154 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 K7EQD1 137 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 CCKP06307 115 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 UBE2L3P68036 154 aaKnown RBP4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 SSBP1Q04837 148 aaKnown RBP4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 RBMY1FQ15415 496 aaKnown RBP4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 C16orf47Q6ZP98 133 aaPredicted RBP4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 C6orf201Q7Z4U5 140 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 ZNF329Q86UD4 541 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 TMEM243Q9BU79 118 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 FAM30AQ9NZY2 134 aa4.49□□□□□ -1.69
SPTLC3-205ENST00000476791 OBSL1O75147 1896 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 FNDC1Q4ZHG4 1894 aaPredicted RBP4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 AGRNO00468 2067 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 TCRBV4S1A1TA0A5B7 111 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 IRGMA1A4Y4 181 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 C19orf71A6NCJ1 209 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 GCHFRP30047 84 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 MP68P56378 58 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 PCBD1P61457 104 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 SUMO2P61956 95 aaKnown RBP4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 C6orf99Q4VX62 202 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 GDF5OSQ5U4N7 250 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 ZNF627Q7L945 461 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 Q8N8P6 123 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 LINC00597Q9H2U6 94 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 PCSK5Q92824 1860 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 IGKV1-8A0A0C4DH67 115 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 A0A0G2JRQ6 117 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 CEBPZOSA8MTT3 80 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 BUB1B-PAK6H3BSN5 160 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 LINC01545Q5VT33 79 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 FOXL2NBQ6ZUU3 175 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 C5orf38Q86SI9 138 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 MORN4Q8NDC4 146 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms