RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 SCN8AQ9UQD0 1980 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 A0A1B0GU33 70 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 C11orf86A6NJI1 115 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 H7C2G1 150 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 YPEL1O60688 119 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 KLF7O75840 302 aaPredicted RBP3.53□□□□□ -1.84
NUP58-209ENST00000476553 CD2P06729 351 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 SLC25A4P12235 298 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 Q6ZUT4 128 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 C9orf62Q8N4C0 152 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 C5orf17Q8NAS9 161 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 RETNLBQ9BQ08 111 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 AGPAT4-IT1Q9H0P7 198 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 FKBP11Q9NYL4 201 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 RPL26L1Q9UNX3 145 aaKnown RBP3.53□□□□□ -1.84
NUP58-209ENST00000476553 KIF13AQ9H1H9 1805 aa3.53□□□□□ -1.84
NUP58-209ENST00000476553 ARID1AO14497 2285 aa3.53□□□□□ -1.85
NUP58-209ENST00000476553 ADGRB1O14514 1584 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 NRKQ7Z2Y5 1582 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 LOC107986453A0A1B0GWG9 222 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 LYRM1O43325 122 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 GNRH2O43555 120 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 ZNF737O75373 536 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 MPC2O95563 127 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 CPSF4O95639 269 aaKnown RBP3.52□□□□□ -1.85
NUP58-209ENST00000476553 PMP2P02689 132 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 CLPSP04118 112 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 BRS3P32247 399 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 PCBD1P61457 104 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 ZNF90Q03938 601 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 Q56UQ5 140 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 PABPC1L2AQ5JQF8 200 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 FAM27BQ5VT28 67 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 MRPL54Q6P161 138 aaKnown RBP3.52□□□□□ -1.85
NUP58-209ENST00000476553 Q6P435 159 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 OR5AS1Q8N127 324 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 Q8N2B8 174 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 PLPP5Q8NEB5 264 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 TAS2R4Q9NYW5 299 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 TPRKBQ9Y3C4 175 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 CHCHD2Q9Y6H1 151 aaPredicted RBP3.52□□□□□ -1.85
NUP58-209ENST00000476553 KIF25-AS1Q9Y6Z4 181 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 S4R3C0 116 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 HSPE1-MOB4S4R3N1 261 aa3.52□□□□□ -1.85
NUP58-209ENST00000476553 TROQ12816 1431 aaPredicted RBP3.52□□□□□ -1.85
NUP58-209ENST00000476553 KTN1Q86UP2 1357 aaKnown RBP3.51□□□□□ -1.85
NUP58-209ENST00000476553 WDR90Q96KV7 1748 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 GREB1Q4ZG55 1949 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 MYH13Q9UKX3 1938 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 IGHV3OR16-8A0A075B7F1 116 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 GEMIN2O14893 280 aaKnown RBP3.51□□□□□ -1.85
NUP58-209ENST00000476553 CTSDP07339 412 aaPredicted RBP3.51□□□□□ -1.85
NUP58-209ENST00000476553 SPINK8P0C7L1 97 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 DEFA4P12838 97 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 SS18Q15532 418 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 IGFL3Q6UXB1 125 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 TTC9CQ8N5M4 171 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 CLEC2BQ92478 149 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 SEC11CQ9BY50 192 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 CFTRP13569 1480 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 MYO5AQ9Y4I1 1855 aaKnown RBP3.51□□□□□ -1.85
NUP58-209ENST00000476553 SCN4AP35499 1836 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 THADAQ6YHU6 1953 aa3.51□□□□□ -1.85
NUP58-209ENST00000476553 DOCK9Q9BZ29 2069 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 COL4A4P53420 1690 aaPredicted RBP3.5□□□□□ -1.85
NUP58-209ENST00000476553 PNMA8CA0A1B0GUJ8 204 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 M0R2P5 195 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 PITX3O75364 302 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 SHBGP04278 402 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 IFITM1P13164 125 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 ZNF14P17017 642 aaPredicted RBP3.5□□□□□ -1.85
NUP58-209ENST00000476553 ASB16-AS1Q495Z4 193 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 FOXI2Q6ZQN5 318 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 Q6ZS52 159 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 LYPD6Q86Y78 171 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 C4orf33Q8N1A6 199 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 Q9H521 79 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 V9GYS6 101 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 PTPRBP23467 1997 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 CDC42BPBQ9Y5S2 1711 aa3.5□□□□□ -1.85
NUP58-209ENST00000476553 ADGRL2O95490 1459 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 LCTP09848 1927 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 C7orf66A4D0T2 115 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 HYPMO75409 117 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 PEBP1P30086 187 aaKnown RBP3.49□□□□□ -1.85
NUP58-209ENST00000476553 NDPQ00604 133 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 CIRBPQ14011 172 aaKnown RBP3.49□□□□□ -1.85
NUP58-209ENST00000476553 ESRGQ1W209 222 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 Q6ZQT0 140 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 SLC35E3Q7Z769 313 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 Q8IYB0 196 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 SVBPQ8N300 66 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 POP5Q969H6 163 aaKnown RBP3.49□□□□□ -1.85
NUP58-209ENST00000476553 NABP2Q9BQ15 211 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 SCP2D1Q9UJQ7 156 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 HHLA3Q9XRX5 114 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 SERP1Q9Y6X1 66 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 LY96Q9Y6Y9 160 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 MINOS1-NBL1R4GNA1 71 aa3.49□□□□□ -1.85
NUP58-209ENST00000476553 BCORL1Q5H9F3 1711 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms