RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 SERF2P84101 59 aa15.2■□□□□ 0.02
MAP1LC3A-204ENST00000476428 KHDC3LQ587J8 217 aa15.2■□□□□ 0.02
MAP1LC3A-204ENST00000476428 ZFAND6Q6FIF0 208 aa15.2■□□□□ 0.02
MAP1LC3A-204ENST00000476428 EXOC3-AS1Q8N2X6 119 aa15.2■□□□□ 0.02
MAP1LC3A-204ENST00000476428 Q8NAQ8 132 aa15.2■□□□□ 0.02
MAP1LC3A-204ENST00000476428 IL17DQ8TAD2 202 aa15.2■□□□□ 0.02
MAP1LC3A-204ENST00000476428 GNPNAT1Q96EK6 184 aaPredicted RBP15.2■□□□□ 0.02
MAP1LC3A-204ENST00000476428 ST6GAL2Q96JF0 529 aa15.2■□□□□ 0.02
MAP1LC3A-204ENST00000476428 SPINK13Q1W4C9 94 aa15.19■□□□□ 0.02
MAP1LC3A-204ENST00000476428 CASC10Q5T4H9 136 aa15.19■□□□□ 0.02
MAP1LC3A-204ENST00000476428 ZNF705AQ6ZN79 300 aaPredicted RBP15.19■□□□□ 0.02
MAP1LC3A-204ENST00000476428 KCNRGQ8N5I3 272 aa15.19■□□□□ 0.02
MAP1LC3A-204ENST00000476428 RPP25LQ8N5L8 163 aaKnown RBP15.19■□□□□ 0.02
MAP1LC3A-204ENST00000476428 OR10J6PQ8NGY7 276 aa15.19■□□□□ 0.02
MAP1LC3A-204ENST00000476428 MRPL53Q96EL3 112 aaKnown RBP15.19■□□□□ 0.02
MAP1LC3A-204ENST00000476428 PRELID1Q9Y255 219 aa15.19■□□□□ 0.02
MAP1LC3A-204ENST00000476428 IGHV4-28A0A0C4DH34 117 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 M0R2Z0 102 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 JTBO76095 146 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 MBP02144 154 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 AMBPP02760 352 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 RBMY1A1P0DJD3 496 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 RBMY1CP0DJD4 496 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 MIFP14174 115 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 UBE2L3P68036 154 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 ICAM4Q14773 271 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 RBMY1FQ15415 496 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 C1orf158Q8N1D5 194 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 PHYHIPLQ96FC7 376 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 C11orf68Q9H3H3 251 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 AAMDCQ9H7C9 122 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 PPP1R14DQ9NXH3 145 aa15.18■□□□□ 0.02
MAP1LC3A-204ENST00000476428 IGHV3OR16-12A0A075B7B8 117 aa15.17■□□□□ 0.02
MAP1LC3A-204ENST00000476428 BOLA2-SMG1P6H3BVE0 249 aa15.17■□□□□ 0.02
MAP1LC3A-204ENST00000476428 HMGB3O15347 200 aaKnown RBP15.17■□□□□ 0.02
MAP1LC3A-204ENST00000476428 CRXO43186 299 aaPredicted RBP15.17■□□□□ 0.02
MAP1LC3A-204ENST00000476428 ZNF345Q14585 488 aa15.17■□□□□ 0.02
MAP1LC3A-204ENST00000476428 IGF2BP2-AS1Q96M15 143 aa15.17■□□□□ 0.02
MAP1LC3A-204ENST00000476428 DNAH7Q8WXX0 4024 aa15.17■□□□□ 0.02
MAP1LC3A-204ENST00000476428 CDC34P49427 236 aaPredicted RBP15.16■□□□□ 0.02
MAP1LC3A-204ENST00000476428 RANP62826 216 aaKnown RBP15.16■□□□□ 0.02
MAP1LC3A-204ENST00000476428 PQLC2Q6ZP29 291 aa15.16■□□□□ 0.02
MAP1LC3A-204ENST00000476428 RAB24Q969Q5 203 aa15.16■□□□□ 0.02
MAP1LC3A-204ENST00000476428 ARPC5LQ9BPX5 153 aa15.16■□□□□ 0.02
MAP1LC3A-204ENST00000476428 GOLT1BQ9Y3E0 138 aa15.16■□□□□ 0.02
MAP1LC3A-204ENST00000476428 A0A0D9SG52 128 aa15.15■□□□□ 0.02
MAP1LC3A-204ENST00000476428 NEU1Q99519 415 aa15.15■□□□□ 0.02
MAP1LC3A-204ENST00000476428 TENM2Q9NT68 2774 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 hCG_2014768A0A024R1R8 64 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 TRAV12-2A0A075B6T6 113 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 NPIPB6E9PJ23 425 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 STAG3L2P0CL84 134 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 STAG3L3P0CL85 134 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 CT45A10P0DMU9 189 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 BAP18Q8IXM2 172 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 TCTE3Q8IZS6 198 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 LYPD1Q8N2G4 141 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 ACTR3CQ9C0K3 210 aaPredicted RBP15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 Q9H3A6 140 aa15.14■□□□□ 0.01
MAP1LC3A-204ENST00000476428 SMIM9A6NGZ8 99 aa15.13■□□□□ 0.01
MAP1LC3A-204ENST00000476428 INSP01308 110 aa15.13■□□□□ 0.01
MAP1LC3A-204ENST00000476428 ERCC8Q13216 396 aa15.13■□□□□ 0.01
MAP1LC3A-204ENST00000476428 ARL14EPLP0DKL9 152 aa15.12■□□□□ 0.01
MAP1LC3A-204ENST00000476428 CDKN1BP46527 198 aa15.12■□□□□ 0.01
MAP1LC3A-204ENST00000476428 AGPAT4-IT1Q9H0P7 198 aa15.12■□□□□ 0.01
MAP1LC3A-204ENST00000476428 BCL2L11O43521 198 aa15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 NANOS2P60321 138 aaKnown RBP15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 PMS2P11Q13670 270 aa15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 KIR3DS1Q14943 382 aa15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 TMUB2Q71RG4 321 aa15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 SSX7Q7RTT5 188 aa15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 C11orf45Q8TAV5 145 aa15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 LINC00477Q96M19 166 aa15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 TMEM208Q9BTX3 173 aa15.11■□□□□ 0.01
MAP1LC3A-204ENST00000476428 IGKV2-40A0A087WW87 121 aaPredicted RBP15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 KANTRA0A1W2PQU2 76 aa15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 IGKV2D-40P01614 121 aaPredicted RBP15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 TSPOP30536 169 aa15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 ZNF726P1Q15940 193 aa15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 AKR1C8PQ5T2L2 129 aa15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 C9orf47Q6ZRZ4 202 aa15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 ODF3Q96PU9 254 aa15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 VGLL1Q99990 258 aa15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 OTORQ9NRC9 128 aa15.1■□□□□ 0.01
MAP1LC3A-204ENST00000476428 PGPA6NDG6 321 aa15.09■□□□□ 0.01
MAP1LC3A-204ENST00000476428 CXorf65A6NEN9 183 aa15.09■□□□□ 0.01
MAP1LC3A-204ENST00000476428 HBE1P02100 147 aa15.09■□□□□ 0.01
MAP1LC3A-204ENST00000476428 GCHFRP30047 84 aa15.09■□□□□ 0.01
MAP1LC3A-204ENST00000476428 CSN1S1P47710 185 aa15.09■□□□□ 0.01
MAP1LC3A-204ENST00000476428 SUN5Q8TC36 379 aa15.09■□□□□ 0.01
MAP1LC3A-204ENST00000476428 ZNF471Q9BX82 626 aaPredicted RBP15.09■□□□□ 0.01
MAP1LC3A-204ENST00000476428 EPPK1P58107 5090 aaKnown RBP15.08■□□□□ 0.01
MAP1LC3A-204ENST00000476428 CXorf1O96002 111 aa15.08■□□□□ 0
MAP1LC3A-204ENST00000476428 PRM2P04554 102 aa15.08■□□□□ 0
MAP1LC3A-204ENST00000476428 LEPP41159 167 aa15.08■□□□□ 0
MAP1LC3A-204ENST00000476428 RRN3P1Q2M238 152 aa15.08■□□□□ 0
MAP1LC3A-204ENST00000476428 HYLS1Q96M11 299 aa15.08■□□□□ 0
MAP1LC3A-204ENST00000476428 LINC01587Q99440 93 aa15.08■□□□□ 0
MAP1LC3A-204ENST00000476428 PLA2G2EQ9NZK7 142 aa15.08■□□□□ 0
MAP1LC3A-204ENST00000476428 CTXND1A0A1B0GTU2 59 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms