RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 PRAC2D3DTV9 90 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 M0R3E3 92 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 C4BPBP20851 252 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 CCL20P78556 96 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 SPATA25Q9BR10 227 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 MAP1LC3BQ9GZQ8 125 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 CXorf1O96002 111 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 TEX261Q6UWH6 196 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 DPPA3Q6W0C5 159 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
CCNL1-217ENST00000476367 RCHY1Q96PM5 261 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 U3KQK5 164 aa10.58□□□□□ -0.72
CCNL1-217ENST00000476367 RAB5CP51148 216 aa10.57□□□□□ -0.72
CCNL1-217ENST00000476367 PSG3Q16557 428 aa10.57□□□□□ -0.72
CCNL1-217ENST00000476367 DEFB135Q30KP9 77 aa10.57□□□□□ -0.72
CCNL1-217ENST00000476367 EIF5AL1Q6IS14 154 aaKnown RBP10.57□□□□□ -0.72
CCNL1-217ENST00000476367 SLC50A1Q9BRV3 221 aa10.57□□□□□ -0.72
CCNL1-217ENST00000476367 TRAV1-1A0A0B4J248 108 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 KIR2DL5BA0A0G2JN68 375 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 KIR2DL5BA0A0G2JPC4 375 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 IGKV3-20P01619 116 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 ZNF705DP0CH99 300 aaPredicted RBP10.56□□□□□ -0.72
CCNL1-217ENST00000476367 ZNF705BP0CI00 300 aaPredicted RBP10.56□□□□□ -0.72
CCNL1-217ENST00000476367 RANP62826 216 aaKnown RBP10.56□□□□□ -0.72
CCNL1-217ENST00000476367 IFITM2Q01629 132 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 KIR2DL5AQ8N109 375 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 ZNF738Q8NE65 137 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 ZNF680Q8NEM1 530 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 KIR2DL5BQ8NHK3 375 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 SFT2D1Q8WV19 159 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 Q9H3A6 140 aa10.56□□□□□ -0.72
CCNL1-217ENST00000476367 YTHDF2Q9Y5A9 579 aaKnown RBP10.56□□□□□ -0.72
CCNL1-217ENST00000476367 A0A0J9YX75 114 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 A8MTW9 85 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 GGTLC3B5MD39 225 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 H3BMM0 161 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 CA1P00915 261 aaPredicted RBP10.55□□□□□ -0.72
CCNL1-217ENST00000476367 GIG44P09565 113 aaPredicted RBP10.55□□□□□ -0.72
CCNL1-217ENST00000476367 H2AFB1P0C5Y9 115 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 ICAM4Q14773 271 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 FOXI2Q6ZQN5 318 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 LYPD6BQ8NI32 183 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 CSTL1Q9H114 145 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 SAV1Q9H4B6 383 aaPredicted RBP10.55□□□□□ -0.72
CCNL1-217ENST00000476367 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 A0A1B0GV50 99 aa10.55□□□□□ -0.72
CCNL1-217ENST00000476367 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
CCNL1-217ENST00000476367 EBLN2Q6P2I7 272 aa10.54□□□□□ -0.72
CCNL1-217ENST00000476367 AMTNQ6UX39 209 aa10.54□□□□□ -0.72
CCNL1-217ENST00000476367 LYPD1Q8N2G4 141 aa10.54□□□□□ -0.72
CCNL1-217ENST00000476367 OR4B1Q8NGF8 309 aa10.54□□□□□ -0.72
CCNL1-217ENST00000476367 RPUSD4Q96CM3 377 aaKnown RBP10.54□□□□□ -0.72
CCNL1-217ENST00000476367 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
CCNL1-217ENST00000476367 ZNF705EA8MWA4 302 aaPredicted RBP10.53□□□□□ -0.72
CCNL1-217ENST00000476367 UBE2CO00762 179 aa10.53□□□□□ -0.72
CCNL1-217ENST00000476367 PSG9Q00887 426 aa10.53□□□□□ -0.72
CCNL1-217ENST00000476367 CCDC28AQ8IWP9 274 aa10.53□□□□□ -0.72
CCNL1-217ENST00000476367 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
CCNL1-217ENST00000476367 TMEM167BQ9NRX6 74 aa10.53□□□□□ -0.72
CCNL1-217ENST00000476367 PGPA6NDG6 321 aa10.52□□□□□ -0.73
CCNL1-217ENST00000476367 UBE2G2P60604 165 aa10.52□□□□□ -0.73
CCNL1-217ENST00000476367 MORN3Q6PF18 240 aaPredicted RBP10.52□□□□□ -0.73
CCNL1-217ENST00000476367 Q6ZWC4 215 aa10.52□□□□□ -0.73
CCNL1-217ENST00000476367 OR8A1Q8NGG7 326 aa10.52□□□□□ -0.73
CCNL1-217ENST00000476367 PCNPQ8WW12 178 aaKnown RBP10.52□□□□□ -0.73
CCNL1-217ENST00000476367 OTORQ9NRC9 128 aa10.52□□□□□ -0.73
CCNL1-217ENST00000476367 A0A1W2PRE2 83 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 RGS13O14921 159 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 CNN1P51911 297 aaKnown RBP10.51□□□□□ -0.73
CCNL1-217ENST00000476367 FXYD7P58549 80 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 HIST1H1AQ02539 215 aaPredicted RBP10.51□□□□□ -0.73
CCNL1-217ENST00000476367 IQCF2Q8IXL9 164 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 CLEC5AQ9NY25 188 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 IGKV2-40A0A087WW87 121 aaPredicted RBP10.51□□□□□ -0.73
CCNL1-217ENST00000476367 SPRY2O43597 315 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 IGKV2D-40P01614 121 aaPredicted RBP10.51□□□□□ -0.73
CCNL1-217ENST00000476367 SUMO1P63165 101 aaKnown RBP10.51□□□□□ -0.73
CCNL1-217ENST00000476367 GNG5P63218 68 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 CLUHP3Q96NS8 147 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 VGLL1Q99990 258 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 SLC35B3Q9H1N7 401 aa10.51□□□□□ -0.73
CCNL1-217ENST00000476367 DIRC3C9JPN6 131 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 PAGE4O60829 102 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 NMBP08949 121 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 ATP5G3P48201 142 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 NUTF2P61970 127 aaKnown RBP10.5□□□□□ -0.73
CCNL1-217ENST00000476367 ERCC8Q13216 396 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 PMS2P11Q13670 270 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 RNF183Q96D59 192 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 AGPAT4-IT1Q9H0P7 198 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 AAMDCQ9H7C9 122 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 XCL2Q9UBD3 114 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 PRELID1Q9Y255 219 aa10.5□□□□□ -0.73
CCNL1-217ENST00000476367 NPIPB6E9PJ23 425 aa10.49□□□□□ -0.73
CCNL1-217ENST00000476367 CT45A10P0DMU9 189 aa10.49□□□□□ -0.73
CCNL1-217ENST00000476367 KIR3DS1Q14943 382 aa10.49□□□□□ -0.73
CCNL1-217ENST00000476367 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
CCNL1-217ENST00000476367 DUSP14O95147 198 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms