RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 M0R2Z0 102 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 TAX1BP3O14907 124 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 IGHV4-39P01824 125 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 LIPFP07098 398 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 RPL27AP46776 148 aaKnown RBP5.39□□□□□ -1.55
UBR4-212ENST00000475973 CRIP1P50238 77 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 GNG5P63218 68 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 ODF1Q14990 250 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 LYPD2Q6UXB3 125 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 SIGLEC15Q6ZMC9 328 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 TCF24Q7RTU0 167 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 DEFB108BQ8NET1 73 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 ZNF414Q96IQ9 312 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 TXN2Q99757 166 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 SHANK2-AS3Q9BTD1 123 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 TMEM133Q9H2Q1 129 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 Q9H3A6 140 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 SERTAD4Q9NUC0 356 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 MTORP42345 2549 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 HRNRQ86YZ3 2850 aaPredicted RBP5.38□□□□□ -1.55
UBR4-212ENST00000475973 ITPR3Q14573 2671 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 TRBV19A0A075B6N1 114 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 TRAV30A0A087WSZ9 112 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 SH2D7A6NKC9 451 aaPredicted RBP5.38□□□□□ -1.55
UBR4-212ENST00000475973 K7EIM0 57 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 NDUFB3O43676 98 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 SLC25A17O43808 307 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 CD5LO43866 347 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 CRLF1O75462 422 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 NDUFA3O95167 84 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 SLC25A5P05141 298 aaKnown RBP5.38□□□□□ -1.55
UBR4-212ENST00000475973 SLC25A16P16260 332 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 FCGR2BP31994 310 aaPredicted RBP5.38□□□□□ -1.55
UBR4-212ENST00000475973 CEACAM3P40198 252 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 GPR6P46095 362 aaPredicted RBP5.38□□□□□ -1.55
UBR4-212ENST00000475973 CDKN1BP46527 198 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 PTTG1IPP53801 180 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 PDE6HQ13956 83 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 BVES-AS1Q5T3Y7 98 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 Q6AWC8 147 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 LINC00173Q6ZV60 143 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 ZNF738Q8NE65 137 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 NPBQ8NG41 125 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 ZNF747Q9BV97 191 aa5.38□□□□□ -1.55
UBR4-212ENST00000475973 SLC25A39Q9BZJ4 359 aaPredicted RBP5.38□□□□□ -1.55
UBR4-212ENST00000475973 IGHV1-3A0A0C4DH29 117 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 SERTM2A0A1B0GWG4 89 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 OR4C46A6NHA9 309 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 FBLL1A6NHQ2 334 aaKnown RBP5.37□□□□□ -1.55
UBR4-212ENST00000475973 VSTM5A8MXK1 200 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 E7EQL1 145 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 BUB1B-PAK6H3BSN5 160 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 LEPROTL1O95214 131 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 P01737 135 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 PPBPP02775 128 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 RNASE1P07998 156 aaKnown RBP5.37□□□□□ -1.55
UBR4-212ENST00000475973 FGF6P10767 208 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 PSG1P11464 419 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 APOBEC3AP31941 199 aaPredicted RBP5.37□□□□□ -1.55
UBR4-212ENST00000475973 CCL8P80075 99 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 LEMD1Q68G75 181 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 C11orf71Q6IPW1 123 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 UNQ5815/PRO19632Q6UWF5 114 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 C2orf91Q6ZV80 131 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 PPP1R27Q86WC6 154 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 ZNF491Q8N8L2 437 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 MAPK1IP1LQ8NDC0 245 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 CFHR4Q92496 578 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 PMCHL2Q9BQD1 86 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 CNFNQ9BYD5 112 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 HEATR1Q9H583 2144 aaKnown RBP5.37□□□□□ -1.55
UBR4-212ENST00000475973 YAE1D1Q9NRH1 226 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 HIGD1AQ9Y241 93 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 ABCA4P78363 2273 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 PLCE1Q9P212 2302 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 ABCA2Q9BZC7 2435 aa5.37□□□□□ -1.55
UBR4-212ENST00000475973 ZFHX3Q15911 3703 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 IGHV4-30-2A0A087WSY4 118 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 A0A1B0GUT8 65 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 NDUFS8O00217 210 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 SIVA1O15304 175 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 NDUFS7O75251 213 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 COX8AP10176 69 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 PF4V1P10720 104 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 ORM2P19652 201 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 NTF3P20783 257 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 EFNA4P52798 201 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 EBI3Q14213 229 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 LGALS9BQ3B8N2 356 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 FBLN7Q53RD9 439 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 Q56UQ5 140 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 LDLRAD2Q5SZI1 272 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 ASPHD1Q5U4P2 390 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 LGALS9CQ6DKI2 356 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 SLC25A34Q6PIV7 304 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 PRIMA1Q86XR5 153 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 OR11H6Q8NGC7 330 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 RNASE8Q8TDE3 154 aaKnown RBP5.36□□□□□ -1.55
UBR4-212ENST00000475973 ZC2HC1AQ96GY0 325 aa5.36□□□□□ -1.55
UBR4-212ENST00000475973 C17orf77Q96MU5 243 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms