RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 KLK15Q9H2R5 256 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 CSPG4Q6UVK1 2322 aa11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 USP9YO00507 2555 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 CHEK1O14757 476 aa11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 IGHV3-11P01762 117 aa11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 NPIPB6E9PJ23 425 aa11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 IGKV2D-40P01614 121 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 TRBV12-3P01733 135 aa11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 OR4B1Q8NGF8 309 aa11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 OR2D3Q8NGH3 330 aa11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 OR5R1Q8NH85 324 aa11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 WIPF2Q8TF74 440 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-215ENST00000475470 CR1P17927 2039 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 A0A0G2JLM5 398 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 IGLV1-40P01703 118 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 GZMBP10144 247 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 HLA-DMBP28068 263 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 PKIAP61925 76 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 LINC00469Q8N7U9 141 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 C14orf144Q96I85 54 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 GFRA4Q9GZZ7 299 aa11.83□□□□□ -0.52
RPUSD3-215ENST00000475470 A0A1B0GUS0 222 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 APCSP02743 223 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 CT45A10P0DMU9 189 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 JOSD1Q15040 202 aaPredicted RBP11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 KIAA1644Q3SXP7 199 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 TMEM256Q8N2U0 113 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 GTSF1Q8WW33 167 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 U3KQE9 123 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 FSHBP01225 129 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 IGHG4P01861 327 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 LCN12Q6JVE5 192 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 PRSS57Q6UWY2 283 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 LCNL1Q6ZST4 164 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 ATP5L2Q7Z4Y8 100 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 OR4X2Q8NGF9 303 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 TMEM18Q96B42 140 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 C8orf49Q96NF6 230 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 SLC50A1Q9BRV3 221 aa11.82□□□□□ -0.52
RPUSD3-215ENST00000475470 FBLL1A6NHQ2 334 aaKnown RBP11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 ZNF705FA8MVS1 300 aaPredicted RBP11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 TSTD3H0UI37 97 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 NDUFA4O00483 81 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 DDTP30046 118 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 CAMPP49913 170 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 CFHR3Q02985 330 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 TMEM95Q3KNT9 176 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 PGLYRP4Q96LB8 373 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 SAPCD1Q5SSQ6 148 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 CYB5R2Q6BCY4 276 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 RBPMS2Q6ZRY4 209 aaKnown RBP11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 C9orf139Q6ZV77 190 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 ZNF580Q9UK33 172 aa11.81□□□□□ -0.52
RPUSD3-215ENST00000475470 NAV2Q8IVL1 2488 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 UNQ9165/PRO28630Q6UXU0 137 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 Q6YL49 198 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 BAGE3Q86Y29 109 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 ABCA12Q86UK0 2595 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 PLA2G2AP14555 144 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 CRIP1P50238 77 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 Q0VG73 95 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 C16orf54Q6UWD8 224 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 RNF182Q8N6D2 247 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 VGLL1Q99990 258 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 VPREB3Q9UKI3 123 aa11.8□□□□□ -0.52
RPUSD3-215ENST00000475470 J3QKU1 62 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 HBBP68871 147 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 SLAQ13239 276 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 GDF5OSQ5U4N7 250 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 KRTAP1-3Q8IUG1 177 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 PRR25Q96S07 402 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 NUPR1O60356 82 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 TP53TG3Q9ULZ0 132 aa11.79□□□□□ -0.52
RPUSD3-215ENST00000475470 SRIP30626 198 aa11.78□□□□□ -0.52
RPUSD3-215ENST00000475470 HIST2H2BCQ6DN03 193 aa11.78□□□□□ -0.52
RPUSD3-215ENST00000475470 C8orf86Q6ZUL3 223 aa11.78□□□□□ -0.52
RPUSD3-215ENST00000475470 REC114Q7Z4M0 266 aa11.78□□□□□ -0.52
RPUSD3-215ENST00000475470 Q8TAT8 98 aa11.78□□□□□ -0.52
RPUSD3-215ENST00000475470 ZNF664Q8N3J9 261 aa11.78□□□□□ -0.52
RPUSD3-215ENST00000475470 SSBP4Q9BWG4 385 aaPredicted RBP11.78□□□□□ -0.52
RPUSD3-215ENST00000475470 NPFFR1Q9GZQ6 430 aa11.78□□□□□ -0.52
RPUSD3-215ENST00000475470 SERF1AO75920 110 aa11.77□□□□□ -0.52
RPUSD3-215ENST00000475470 OR10J3Q5JRS4 329 aa11.77□□□□□ -0.52
RPUSD3-215ENST00000475470 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.52
RPUSD3-215ENST00000475470 GLMPQ8WWB7 406 aa11.77□□□□□ -0.52
RPUSD3-215ENST00000475470 NDFIP1Q9BT67 221 aa11.77□□□□□ -0.52
RPUSD3-215ENST00000475470 PRAC2D3DTV9 90 aa11.77□□□□□ -0.53
RPUSD3-215ENST00000475470 F2Z2F3 143 aa11.77□□□□□ -0.53
RPUSD3-215ENST00000475470 HOXA3O43365 443 aaPredicted RBP11.77□□□□□ -0.53
RPUSD3-215ENST00000475470 PSMB8P28062 276 aa11.77□□□□□ -0.53
RPUSD3-215ENST00000475470 FOXA3P55318 350 aaPredicted RBP11.77□□□□□ -0.53
RPUSD3-215ENST00000475470 COX8CQ7Z4L0 72 aa11.77□□□□□ -0.53
RPUSD3-215ENST00000475470 PRRC2AP48634 2157 aaKnown RBP11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 TRAV8-2A0A0B4J237 113 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms