RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 IFNA4P05014 189 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 IDO1P14902 403 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 RTL8BQ17RB0 113 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 GLIPR1L1Q6UWM5 242 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 STX19Q8N4C7 294 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 OR10AC1Q8NH08 325 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 PLEKHB2Q96CS7 222 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 RTL8AQ9BWD3 113 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 MAP1LC3BQ9GZQ8 125 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 ADGBQ8N7X0 1667 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 TRAV23DV6A0A075B6W5 121 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 JMJD7-PLA2G4BH0Y9G9 81 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 TCTAP57738 103 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 VBP1P61758 197 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 MIR22HGQ0VDD5 57 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 FAM24BQ8N5W8 94 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 FAM216BQ8N7L0 139 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 NEK7Q8TDX7 302 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 BOLA2Q9H3K6 86 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 C10orf95Q9H7T3 257 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 TAF9BQ9HBM6 251 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 MED11Q9P086 117 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 NAV3Q8IVL0 2385 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 CACNA1EQ15878 2313 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 TRPM7Q96QT4 1865 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 CAMSAP2Q08AD1 1489 aa0.48□□□□□ -2.33
LTN1-204ENST00000475344 GPR31O00270 319 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 CST7O76096 145 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 CD14P08571 375 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 C3orf33Q6P1S2 294 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 FOXI2Q6ZQN5 318 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 DYDC1Q8WWB3 177 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 BORCS8Q96FH0 119 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 OR2H1Q9GZK4 316 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 BIN3Q9NQY0 253 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 NISCHQ9Y2I1 1504 aa0.47□□□□□ -2.33
LTN1-204ENST00000475344 PIK3C2AO00443 1686 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 NAV2Q8IVL1 2488 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 ANK1P16157 1881 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 E5RI56 91 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 H7BYZ3 331 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 LYRM1O43325 122 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 SERPINB1P30740 379 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 RPL35P42766 123 aaKnown RBP0.46□□□□□ -2.34
LTN1-204ENST00000475344 CIRBPQ14011 172 aaKnown RBP0.46□□□□□ -2.34
LTN1-204ENST00000475344 SPATA45Q537H7 98 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 TRIQKQ629K1 86 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 ANGPTL5Q86XS5 388 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 PRR15Q8IV56 129 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 TCEAL2Q9H3H9 227 aaPredicted RBP0.46□□□□□ -2.34
LTN1-204ENST00000475344 LRTM1Q9HBL6 345 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 NAT8BQ9UHF3 227 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 TECPR2O15040 1411 aa0.46□□□□□ -2.34
LTN1-204ENST00000475344 RTL9Q8NET4 1388 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 SYNMO15061 1565 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 MEGF8Q7Z7M0 2845 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 MYH1P12882 1939 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 PPP5D1E7EU14 171 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 H3BQV1 296 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 MT-ND6P03923 174 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 DIAPH2-AS1Q14236 149 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 SPINK9Q5DT21 86 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 DCUN1D2Q6PH85 259 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 ZCCHC23Q6ZST2 131 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 LINC00269Q8N2A0 174 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 LIMD2Q9BT23 127 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 IL20Q9NYY1 176 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 NUBP2Q9Y5Y2 271 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 FER1L6Q2WGJ9 1857 aa0.45□□□□□ -2.34
LTN1-204ENST00000475344 SYNE2Q8WXH0 6885 aaKnown RBP0.45□□□□□ -2.34
LTN1-204ENST00000475344 ATG2AQ2TAZ0 1938 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 A0A096LPI6 279 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 MAP1LC3B2A6NCE7 125 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 KPNA4O00629 521 aaPredicted RBP0.44□□□□□ -2.34
LTN1-204ENST00000475344 FXYD4P59646 89 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 VMA21Q3ZAQ7 101 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 CROCCP2Q86T23 111 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 ATOH7Q8N100 152 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 CST11Q9H112 138 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 NIT2Q9NQR4 276 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 TPRKBQ9Y3C4 175 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 ERBINQ96RT1 1412 aa0.44□□□□□ -2.34
LTN1-204ENST00000475344 TRDV1A0A1B0GX56 115 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 GABARAPH6UMI1 98 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 K7EIL1 84 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 IGHV3-33P01772 117 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 FABP2P12104 132 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 FOXA3P55318 350 aaPredicted RBP0.43□□□□□ -2.34
LTN1-204ENST00000475344 OCIAD2Q56VL3 154 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 TMEM78Q5T7P6 136 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 CCL4L1Q8NHW4 92 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 DIRC1Q969H9 104 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 OR4C12Q96R67 309 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 PCBD2Q9H0N5 130 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 LAMTOR3Q9UHA4 124 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 BCL9O00512 1426 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 YTHDC2Q9H6S0 1430 aaKnown RBP0.43□□□□□ -2.34
LTN1-204ENST00000475344 BDP1A6H8Y1 2624 aa0.43□□□□□ -2.34
LTN1-204ENST00000475344 ABCA1O95477 2261 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms