RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 RNF126Q9BV68 326 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 ZNF331Q9NQX6 463 aaPredicted RBP6.74□□□□□ -1.33
PDPN-204ENST00000475043 DKK2Q9UBU2 259 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 ALMS1Q8TCU4 4167 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 PLECQ15149 4684 aaKnown RBP6.73□□□□□ -1.33
PDPN-204ENST00000475043 TRAV5A0A0B4J249 113 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 ZNF705GA8MUZ8 300 aaPredicted RBP6.73□□□□□ -1.33
PDPN-204ENST00000475043 INMT-MINDY4F8WBC2 141 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 CRXO43186 299 aaPredicted RBP6.73□□□□□ -1.33
PDPN-204ENST00000475043 PRM2P04554 102 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 HTN1P15515 57 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 CXCL2P19875 107 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 B2MP61769 119 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 ATP6V1FQ16864 119 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 VWC2Q2TAL6 325 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 SLC39A9Q9NUM3 307 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 PXMP4Q9Y6I8 212 aa6.73□□□□□ -1.33
PDPN-204ENST00000475043 SLC17A3O00476 420 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 PRAF2O60831 178 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 IGLC2P0DOY2 106 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 RPL29P47914 159 aaKnown RBP6.72□□□□□ -1.33
PDPN-204ENST00000475043 DEFA1P59665 94 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 DEFA3P59666 94 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 DAD1P61803 113 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 NHLH2Q02577 135 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 OR10J6PQ8NGY7 276 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 THAP6Q8TBB0 222 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 LINC01587Q99440 93 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 NMES1Q9C002 83 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 SLC25A31Q9H0C2 315 aa6.72□□□□□ -1.33
PDPN-204ENST00000475043 E5RGE8 158 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 H3BQ15 152 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 SSNA1O43805 119 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 MPDU1O75352 247 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 CDKN1BP46527 198 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 CYCSP99999 105 aaKnown RBP6.71□□□□□ -1.34
PDPN-204ENST00000475043 GUK1Q16774 197 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 TMEM256Q8N2U0 113 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 OR5C1Q8NGR4 320 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 NPCDR1Q9BY65 106 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 OR5AC2Q9NZP5 309 aa6.71□□□□□ -1.34
PDPN-204ENST00000475043 EPPK1P58107 5090 aaKnown RBP6.71□□□□□ -1.34
PDPN-204ENST00000475043 PRAC2D3DTV9 90 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 P0DMU3 169 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 FAM231AP0DMU4 169 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 FAM231CP0DMU5 169 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 DEFB130BP0DP73 79 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 DEFB130AP0DP74 79 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 AZU1P20160 251 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 H2BFSP57053 126 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 CLINT1Q14677 625 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 OXA1LQ15070 435 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 SAT2Q96F10 170 aaPredicted RBP6.7□□□□□ -1.34
PDPN-204ENST00000475043 MARVELD1Q9BSK0 173 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 PARD6GQ9BYG4 376 aaPredicted RBP6.7□□□□□ -1.34
PDPN-204ENST00000475043 ZNF586Q9NXT0 402 aa6.7□□□□□ -1.34
PDPN-204ENST00000475043 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 H0YIZ8 118 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 J3KRW8 73 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 PYYP10082 97 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 TSPOP30536 169 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 TAS2R60P59551 318 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 FCN2Q15485 313 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 GCSAMLQ5JQS6 135 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 UBE2DNLQ8IWF7 75 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 CHAC2Q8WUX2 184 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 BLNKQ8WV28 456 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 PPP1R1CQ8WVI7 109 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 FAM210BQ96KR6 192 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 BATF3Q9NR55 127 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 TIMM9Q9Y5J7 89 aa6.69□□□□□ -1.34
PDPN-204ENST00000475043 TRBV19A0A075B6N1 114 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 H7BYZ3 331 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 M0R3E3 92 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 ZNF253O75346 499 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 PET100P0DJ07 73 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 HIST1H1EP10412 219 aaKnown RBP6.68□□□□□ -1.34
PDPN-204ENST00000475043 TMEM88Q6PEY1 159 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 POM121L12Q8N7R1 296 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 C16orf74Q96GX8 76 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 KCNIP2Q9NS61 270 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 TMEM14CQ9P0S9 112 aa6.68□□□□□ -1.34
PDPN-204ENST00000475043 TRAV12-3A0A0B4J271 114 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 PLAC8L1A1L4L8 177 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 NPIPB6E9PJ23 425 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 C17orf112F2Z3M2 114 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 MPC2O95563 127 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 CT45A10P0DMU9 189 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 LEPP41159 167 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 GFI1BQ5VTD9 330 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 MIR17HGQ75NE6 70 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 CCDC28AQ8IWP9 274 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 EXOC3-AS1Q8N2X6 119 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 C20orf144Q9BQM9 153 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 SLC25A2Q9BXI2 301 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 SMIM3Q9BZL3 60 aa6.67□□□□□ -1.34
PDPN-204ENST00000475043 WDR61Q9GZS3 305 aaKnown RBP6.67□□□□□ -1.34
PDPN-204ENST00000475043 AAMDCQ9H7C9 122 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms