RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 C7orf33Q8WU49 177 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 CHAC2Q8WUX2 184 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 VAX2Q9UIW0 290 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 A0A1B0GVG6 124 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 DISC1C4P0D8 188 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 GATA2P23769 480 aaPredicted RBP5.16□□□□□ -1.58
USP54-211ENST00000474929 S100A5P33763 92 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 BCAP31P51572 246 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 PIGPP57054 158 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 MRPS10P82664 201 aaKnown RBP5.16□□□□□ -1.58
USP54-211ENST00000474929 IZUMO4Q1ZYL8 232 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 BSXQ3C1V8 233 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 LHFPL1Q86WI0 220 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 ARRDC1Q8N5I2 433 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 THAP8Q8NA92 274 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 OR13C8Q8NGS7 320 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 ZFAND1Q8TCF1 268 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 SMIM4Q8WVI0 70 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 RNF185Q96GF1 192 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 SEC22AQ96IW7 307 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 C8orf49Q96NF6 230 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 SOSTQ9BQB4 213 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 MCUBQ9NWR8 336 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 COPZ2Q9P299 210 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 PAIP2BQ9ULR5 123 aaKnown RBP5.16□□□□□ -1.58
USP54-211ENST00000474929 SLC45A2Q9UMX9 530 aa5.16□□□□□ -1.58
USP54-211ENST00000474929 TEX13DA0A0J9YY54 714 aaPredicted RBP5.15□□□□□ -1.59
USP54-211ENST00000474929 E5RGE8 158 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 CTDSPLO15194 276 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 SPINK4O60575 86 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 PTTG1O95997 202 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 CFDP00746 253 aaPredicted RBP5.15□□□□□ -1.59
USP54-211ENST00000474929 IGKV1-39P01597 117 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 IGKV1D-39P04432 117 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 AKAIN1P0CW23 69 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 TBPP20226 339 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 VAMP1P23763 118 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 SSBP1Q04837 148 aaKnown RBP5.15□□□□□ -1.59
USP54-211ENST00000474929 MEF2DQ14814 521 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 TRIM16LQ309B1 348 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 OR10J3Q5JRS4 329 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 IQCF2Q8IXL9 164 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 OR51S1Q8NGJ8 323 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 BAALCQ8WXS3 180 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 MRGPRFQ96AM1 343 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 ZC2HC1AQ96GY0 325 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 TP53RKQ96S44 253 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 RTBDNQ9BSG5 229 aaPredicted RBP5.15□□□□□ -1.59
USP54-211ENST00000474929 CCDC32Q9BV29 185 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 RABL2AQ9UBK7 228 aaPredicted RBP5.15□□□□□ -1.59
USP54-211ENST00000474929 RABL2BQ9UNT1 228 aa5.15□□□□□ -1.59
USP54-211ENST00000474929 TRAV26-2A0A0B4J265 109 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 C3orf85A0A1B0GTC6 90 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 LINC00854A0A1B0GVQ3 168 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 ANKRD20A5PA0PJZ0 165 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 GGTLC3B5MD39 225 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 CCNKO75909 580 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 TCL1AP56279 114 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 DEFA1P59665 94 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 DEFA3P59666 94 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 RND3P61587 244 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 LYZP61626 148 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 SPINK9Q5DT21 86 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 IBA57Q5T440 356 aaKnown RBP5.14□□□□□ -1.59
USP54-211ENST00000474929 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 CCDC71LQ8N9Z2 235 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 NPIPB3Q92617 1050 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 ZNF486Q96H40 463 aaPredicted RBP5.14□□□□□ -1.59
USP54-211ENST00000474929 ACY3Q96HD9 319 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 C14orf166Q9Y224 244 aaKnown RBP5.14□□□□□ -1.59
USP54-211ENST00000474929 TMEM56-RWDD3S4R434 201 aa5.14□□□□□ -1.59
USP54-211ENST00000474929 ZFP92A6NM28 416 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 SNRPGP15A8MWD9 76 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 UPK1BO75841 260 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 IGKV1-5P01602 117 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 IGHV3-53P01767 116 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 IGHV3-30P01768 117 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 IGHV3-33P01772 117 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 IGHV3-30-3P0DP02 117 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 IGHV3-30-5P0DP03 117 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 AKR1C4P17516 323 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 AKR1C2P52895 323 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 FHL2Q14192 279 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 MLANAQ16655 118 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 NDUFA5Q16718 116 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 ANXA2RQ3ZCQ2 193 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 C2orf83Q53S99 150 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 GFI1BQ5VTD9 330 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 SPINK6Q6UWN8 80 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 CCDC190Q86UF4 302 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 TOMM5Q8N4H5 51 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 RNASE11Q8TAA1 199 aaKnown RBP5.13□□□□□ -1.59
USP54-211ENST00000474929 PRRT1Q99946 306 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 RSG1Q9BU20 258 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 GSN-AS1Q9NRJ2 163 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 PRR13Q9NZ81 148 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 SCP2D1Q9UJQ7 156 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 GPR132Q9UNW8 380 aa5.13□□□□□ -1.59
USP54-211ENST00000474929 FAM231BA6NCW3 169 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms