RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 SLC35B1P78383 322 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 PLGLB1Q02325 96 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 ERCC8Q13216 396 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 PDE6HQ13956 83 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 ALKBH6Q3KRA9 238 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 MDS2Q8NDY4 140 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 PPDPFLQ8WWR9 84 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 DLX4Q92988 240 aaPredicted RBP3.15□□□□□ -1.91
USP16-205ENST00000474835 MCRIP2Q9BUT9 160 aaKnown RBP3.15□□□□□ -1.91
USP16-205ENST00000474835 ZFAND3Q9H8U3 227 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 AP5S1Q9NUS5 200 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 SVILO95425 2214 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 ASXL3Q9C0F0 2248 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 RBAKDNA6NC62 111 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 J3KRW8 73 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 SPINK2P20155 84 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 S100GP29377 79 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 TCL1AP56279 114 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 TAS2R45P59539 299 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 FAM19A3Q7Z5A8 133 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 Q8N8P6 123 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 C1orf162Q8NEQ5 155 aaPredicted RBP3.14□□□□□ -1.91
USP16-205ENST00000474835 PRELID3AQ96N28 172 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 ARFGEF3Q5TH69 2177 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 IGHV5-10-1A0A0J9YXX1 117 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 KBTBD11-OT1A0A1B0GTJ5 212 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 A0A1B0GUT8 65 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 CD27P26842 260 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 ARF1P84077 181 aaKnown RBP3.14□□□□□ -1.91
USP16-205ENST00000474835 MLANAQ16655 118 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 AMN1Q8IY45 258 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 DCANP1Q8TF63 244 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 SSMEM1Q8WWF3 244 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 DNAJC30Q96LL9 226 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 IMUPQ9GZP8 106 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 CSDC2Q9Y534 153 aaKnown RBP3.14□□□□□ -1.91
USP16-205ENST00000474835 SMAD5-AS1Q9Y6J3 95 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 A0A0B4J2C4 111 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 IGKV1-16P04430 117 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 CFC1BP0CG36 223 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 CFC1P0CG37 223 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 CD59P13987 128 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 CEBPDP49716 269 aaPredicted RBP3.14□□□□□ -1.91
USP16-205ENST00000474835 GNG5P63218 68 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 RPL39P5Q59GN2 51 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 C19orf54Q5BKX5 351 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 TMEM251Q8N6I4 163 aa3.14□□□□□ -1.91
USP16-205ENST00000474835 PCNX2A6NKB5 2137 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 A0A0J9YY99 117 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 FBLL1A6NHQ2 334 aaKnown RBP3.13□□□□□ -1.91
USP16-205ENST00000474835 IGIPA6NJ69 53 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 K7EQM0 130 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 TM4SF5O14894 197 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 TCL1BO95988 128 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 CSN3P07498 182 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ELANEP08246 267 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ZNF688P0C7X2 276 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 VEGFBP49765 207 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ZNF80P51504 273 aaPredicted RBP3.13□□□□□ -1.91
USP16-205ENST00000474835 S100A7AQ86SG5 101 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 GPHB5Q86YW7 130 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 TMEM178AQ8NBL3 297 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 RTL8AQ9BWD3 113 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ONECUT1Q9UBC0 465 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 MSRB2Q9Y3D2 182 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ANK2Q01484 3957 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 MYMXA0A1B0GTQ4 84 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 A0A1W2PPI3 338 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 CRYGAP11844 174 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 HOXA4Q00056 320 aaPredicted RBP3.13□□□□□ -1.91
USP16-205ENST00000474835 GAGE13Q4V321 117 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ZNF542PQ5EBM4 170 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ZNF474Q6S9Z5 364 aaPredicted RBP3.13□□□□□ -1.91
USP16-205ENST00000474835 SLC25A29Q8N8R3 303 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 OR1L4Q8NGR5 311 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 GAFA1Q96PS6 74 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 SHANK2-AS3Q9BTD1 123 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 PAXXQ9BUH6 204 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 TMEM126AQ9H061 195 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 RAB1BQ9H0U4 201 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 AKIRIN1Q9H9L7 192 aaPredicted RBP3.13□□□□□ -1.91
USP16-205ENST00000474835 AKAP13Q12802 2813 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 WNT9BO14905 357 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 CER1O95813 267 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 IGKV1-17P01599 117 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 CACNG7P62955 275 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ETDBQ3ZM63 59 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 LYPD5Q6UWN5 251 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 LRRC75A-AS1Q8N1F1 130 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 PRR25Q96S07 402 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 C16orf95Q9H693 158 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 RPUSD1Q9UJJ7 312 aaKnown RBP3.13□□□□□ -1.91
USP16-205ENST00000474835 HILPDAQ9Y5L2 63 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 U3KQE9 123 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 ZNF318Q5VUA4 2279 aa3.13□□□□□ -1.91
USP16-205ENST00000474835 TRAV4A0A0B4J268 109 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 ATP5LO75964 103 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 NTF3P20783 257 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 ZNF157P51786 506 aaPredicted RBP3.12□□□□□ -1.91
USP16-205ENST00000474835 TSPEAR-AS2P59090 65 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms