RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ZC2HC1AQ96GY0 325 aa16.76■□□□□ 0.27
CCM2-206ENST00000474617 PRRC2AP48634 2157 aaKnown RBP16.76■□□□□ 0.27
CCM2-206ENST00000474617 J3QKU1 62 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 IGHV4-59P01825 116 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 AMBPP02760 352 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 LCN12Q6JVE5 192 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 LINC00322Q6ZN03 302 aaPredicted RBP16.75■□□□□ 0.27
CCM2-206ENST00000474617 OR2D3Q8NGH3 330 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 KMT2BQ9UMN6 2715 aaPredicted RBP16.75■□□□□ 0.27
CCM2-206ENST00000474617 IGHV3-35A0A0C4DH35 117 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 PDZD11Q5EBL8 140 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 FAM162BQ5T6X4 162 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 NOL4LQ96MY1 436 aaPredicted RBP16.75■□□□□ 0.27
CCM2-206ENST00000474617 LINC00527Q9UJ94 153 aa16.75■□□□□ 0.27
CCM2-206ENST00000474617 SLC35B1P78383 322 aa16.74■□□□□ 0.27
CCM2-206ENST00000474617 OR4X2Q8NGF9 303 aa16.74■□□□□ 0.27
CCM2-206ENST00000474617 Q96MF0 132 aa16.74■□□□□ 0.27
CCM2-206ENST00000474617 PRR25Q96S07 402 aa16.74■□□□□ 0.27
CCM2-206ENST00000474617 NPFFR1Q9GZQ6 430 aa16.74■□□□□ 0.27
CCM2-206ENST00000474617 NIT2Q9NQR4 276 aa16.74■□□□□ 0.27
CCM2-206ENST00000474617 PPP1R14DQ9NXH3 145 aa16.74■□□□□ 0.27
CCM2-206ENST00000474617 A8MWP6 167 aa16.73■□□□□ 0.27
CCM2-206ENST00000474617 K7EMT4 169 aa16.73■□□□□ 0.27
CCM2-206ENST00000474617 GLMPQ8WWB7 406 aa16.73■□□□□ 0.27
CCM2-206ENST00000474617 HAX1O00165 279 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 SPINK4O60575 86 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 PLA2G2AP14555 144 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 PSMB8P28062 276 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 DMRTA1Q5VZB9 504 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 BAGE3Q86Y29 109 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 BORCS7Q96B45 105 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 USP9YO00507 2555 aaPredicted RBP16.72■□□□□ 0.27
CCM2-206ENST00000474617 PTPN13Q12923 2485 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 NAV2Q8IVL1 2488 aa16.72■□□□□ 0.27
CCM2-206ENST00000474617 RIGQ13278 110 aa16.71■□□□□ 0.27
CCM2-206ENST00000474617 PYY3Q5JQD4 70 aa16.71■□□□□ 0.27
CCM2-206ENST00000474617 GTSF1Q8WW33 167 aa16.71■□□□□ 0.27
CCM2-206ENST00000474617 PEF1Q9UBV8 284 aaKnown RBP16.71■□□□□ 0.27
CCM2-206ENST00000474617 JOSD1Q15040 202 aaPredicted RBP16.7■□□□□ 0.26
CCM2-206ENST00000474617 FAM106AQ4KMX7 169 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 C8orf86Q6ZUL3 223 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 TMEM86BQ8N661 226 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 LENEPQ9Y5L5 61 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 ELANEP08246 267 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 FOXE3Q13461 319 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 TCF24Q7RTU0 167 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 GPHB5Q86YW7 130 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 GATD1Q8NB37 220 aa16.7■□□□□ 0.26
CCM2-206ENST00000474617 IGKV2-40A0A087WW87 121 aaPredicted RBP16.69■□□□□ 0.26
CCM2-206ENST00000474617 A0A1B0GUT8 65 aa16.69■□□□□ 0.26
CCM2-206ENST00000474617 IGKV2D-40P01614 121 aaPredicted RBP16.69■□□□□ 0.26
CCM2-206ENST00000474617 KLF5Q13887 457 aaPredicted RBP16.69■□□□□ 0.26
CCM2-206ENST00000474617 KRTAP1-3Q8IUG1 177 aa16.69■□□□□ 0.26
CCM2-206ENST00000474617 KLK15Q9H2R5 256 aa16.69■□□□□ 0.26
CCM2-206ENST00000474617 DAZ1Q9NQZ3 744 aaKnown RBP16.69■□□□□ 0.26
CCM2-206ENST00000474617 IGHV3OR16-8A0A075B7F1 116 aa16.68■□□□□ 0.26
CCM2-206ENST00000474617 TMEM189A5PLL7 270 aa16.68■□□□□ 0.26
CCM2-206ENST00000474617 PSMG3-AS1Q96PY0 264 aa16.68■□□□□ 0.26
CCM2-206ENST00000474617 ASCL2Q99929 193 aa16.68■□□□□ 0.26
CCM2-206ENST00000474617 CR1P17927 2039 aa16.68■□□□□ 0.26
CCM2-206ENST00000474617 UTP20O75691 2785 aaKnown RBP16.67■□□□□ 0.26
CCM2-206ENST00000474617 FRMD6-AS1P0C7T7 363 aa16.67■□□□□ 0.26
CCM2-206ENST00000474617 MAPK1IP1LQ8NDC0 245 aa16.67■□□□□ 0.26
CCM2-206ENST00000474617 PGLYRP4Q96LB8 373 aa16.67■□□□□ 0.26
CCM2-206ENST00000474617 UFC1Q9Y3C8 167 aa16.67■□□□□ 0.26
CCM2-206ENST00000474617 FBN2P35556 2912 aa16.67■□□□□ 0.26
CCM2-206ENST00000474617 CREBBPQ92793 2442 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 GRIFINA4D1Z8 144 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 APOHP02749 345 aaPredicted RBP16.66■□□□□ 0.26
CCM2-206ENST00000474617 SRIP30626 198 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 CRIP1P50238 77 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 TMEM78Q5T7P6 136 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 C9orf47Q6ZRZ4 202 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 Q6ZS46 218 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 C16orf92Q96LL3 132 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 CRYBG3Q68DQ2 2970 aa16.66■□□□□ 0.26
CCM2-206ENST00000474617 IGHV7-4-1A0A0J9YVY3 117 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 FABP5P3A8MUU1 101 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 SH2D1AO60880 128 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 CAMPP49913 170 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 SLAQ13239 276 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 TMEM256Q8N2U0 113 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 RNF152Q8N8N0 203 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 TRAV8-2A0A0B4J237 113 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 OVOL1O14753 267 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 SERF1AO75920 110 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 ZNF138P52744 262 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 Q8N2B8 174 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 C8orf49Q96NF6 230 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 VGLL1Q99990 258 aa16.65■□□□□ 0.26
CCM2-206ENST00000474617 TRBV12-3P01733 135 aa16.64■□□□□ 0.25
CCM2-206ENST00000474617 IGHV3-11P01762 117 aa16.64■□□□□ 0.25
CCM2-206ENST00000474617 HIST1H1AQ02539 215 aaPredicted RBP16.64■□□□□ 0.25
CCM2-206ENST00000474617 IQCJQ1A5X6 159 aa16.64■□□□□ 0.25
CCM2-206ENST00000474617 UNQ9165/PRO28630Q6UXU0 137 aa16.64■□□□□ 0.25
CCM2-206ENST00000474617 MYOZ3Q8TDC0 251 aa16.64■□□□□ 0.25
CCM2-206ENST00000474617 KCNS1Q96KK3 526 aa16.64■□□□□ 0.25
CCM2-206ENST00000474617 TP53TG3Q9ULZ0 132 aa16.64■□□□□ 0.25
CCM2-206ENST00000474617 IGHV3-66A0A0C4DH42 116 aa16.63■□□□□ 0.25
CCM2-206ENST00000474617 TRBV7-9A0A0J9YWB2 115 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms