RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 SMIM9A6NGZ8 99 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
ITGB1-210ENST00000474568 IGLL5B9A064 214 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 AMBPP02760 352 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 GUK1Q16774 197 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 RRN3P1Q2M238 152 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 FFAR4Q5NUL3 377 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 KCNIP2Q9NS61 270 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 TMEM14CQ9P0S9 112 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 TIMM9Q9Y5J7 89 aa11.48□□□□□ -0.57
ITGB1-210ENST00000474568 TRBV19A0A075B6N1 114 aa11.47□□□□□ -0.57
ITGB1-210ENST00000474568 TRAV10A0A0B4J240 114 aa11.47□□□□□ -0.57
ITGB1-210ENST00000474568 J3KRW8 73 aa11.47□□□□□ -0.57
ITGB1-210ENST00000474568 M0R3E3 92 aa11.47□□□□□ -0.57
ITGB1-210ENST00000474568 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
ITGB1-210ENST00000474568 HIST1H1EP10412 219 aaKnown RBP11.47□□□□□ -0.57
ITGB1-210ENST00000474568 FAM167A-AS1Q96KT0 104 aa11.47□□□□□ -0.57
ITGB1-210ENST00000474568 TMEM189A5PLL7 270 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 C11orf94C9JXX5 98 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 NDUFB4O95168 129 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 OR10J4P0C629 311 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 SPART-AS1P0CW21 52 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 HTN1P15515 57 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 KIR3DS1Q14943 382 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 RGS21Q2M5E4 152 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 Q5BKY6 102 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 FAM222AQ5U5X8 452 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 EXOC3-AS1Q8N2X6 119 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 RPP25LQ8N5L8 163 aaKnown RBP11.46□□□□□ -0.57
ITGB1-210ENST00000474568 LINC01587Q99440 93 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 FUT9Q9Y231 359 aa11.46□□□□□ -0.57
ITGB1-210ENST00000474568 YTHDF2Q9Y5A9 579 aaKnown RBP11.46□□□□□ -0.57
ITGB1-210ENST00000474568 ERCC8Q13216 396 aa11.45□□□□□ -0.58
ITGB1-210ENST00000474568 PAXXQ9BUH6 204 aa11.45□□□□□ -0.58
ITGB1-210ENST00000474568 MRPL32Q9BYC8 188 aaKnown RBP11.45□□□□□ -0.58
ITGB1-210ENST00000474568 OR51M1Q9H341 326 aa11.45□□□□□ -0.58
ITGB1-210ENST00000474568 DEFB131BA0A096LNP1 70 aa11.44□□□□□ -0.58
ITGB1-210ENST00000474568 OR7C2O60412 319 aa11.44□□□□□ -0.58
ITGB1-210ENST00000474568 ZNF253O75346 499 aa11.44□□□□□ -0.58
ITGB1-210ENST00000474568 AZU1P20160 251 aa11.44□□□□□ -0.58
ITGB1-210ENST00000474568 CDKN1BP46527 198 aa11.44□□□□□ -0.58
ITGB1-210ENST00000474568 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
ITGB1-210ENST00000474568 DKK2Q9UBU2 259 aa11.44□□□□□ -0.58
ITGB1-210ENST00000474568 NBEAP1P0C6P0 100 aa11.43□□□□□ -0.58
ITGB1-210ENST00000474568 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
ITGB1-210ENST00000474568 HTN3P15516 51 aa11.43□□□□□ -0.58
ITGB1-210ENST00000474568 ICAM4Q14773 271 aa11.43□□□□□ -0.58
ITGB1-210ENST00000474568 RNF141Q8WVD5 230 aa11.43□□□□□ -0.58
ITGB1-210ENST00000474568 FXYD5Q96DB9 178 aa11.43□□□□□ -0.58
ITGB1-210ENST00000474568 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 NPIPB6E9PJ23 425 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 GIPP09681 153 aaPredicted RBP11.42□□□□□ -0.58
ITGB1-210ENST00000474568 PDE6HQ13956 83 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 GFI1BQ5VTD9 330 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 HSD17B11Q8NBQ5 300 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 ZNF503Q96F45 646 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 PHYHIPLQ96FC7 376 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 AAMDCQ9H7C9 122 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 APLNQ9ULZ1 77 aa11.42□□□□□ -0.58
ITGB1-210ENST00000474568 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
ITGB1-210ENST00000474568 FXYD6-FXYD2A0A087WZ82 144 aa11.41□□□□□ -0.58
ITGB1-210ENST00000474568 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
ITGB1-210ENST00000474568 TSPOP30536 169 aa11.41□□□□□ -0.58
ITGB1-210ENST00000474568 RAB2AP61019 212 aa11.41□□□□□ -0.58
ITGB1-210ENST00000474568 UBE2L3P68036 154 aaKnown RBP11.41□□□□□ -0.58
ITGB1-210ENST00000474568 OXA1LQ15070 435 aa11.41□□□□□ -0.58
ITGB1-210ENST00000474568 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
ITGB1-210ENST00000474568 PRELID1Q9Y255 219 aa11.41□□□□□ -0.58
ITGB1-210ENST00000474568 LEPP41159 167 aa11.4□□□□□ -0.58
ITGB1-210ENST00000474568 DAD1P61803 113 aa11.4□□□□□ -0.58
ITGB1-210ENST00000474568 ACOT6Q3I5F7 207 aaPredicted RBP11.4□□□□□ -0.58
ITGB1-210ENST00000474568 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
ITGB1-210ENST00000474568 VPS13DQ5THJ4 4388 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 TRAV12-3A0A0B4J271 114 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 TEX48A0A1B0GUV7 120 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 HMGB3O15347 200 aaKnown RBP11.39□□□□□ -0.59
ITGB1-210ENST00000474568 TAS2R45P59539 299 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 TAS2R60P59551 318 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 RANP62826 216 aaKnown RBP11.39□□□□□ -0.59
ITGB1-210ENST00000474568 KHDC3LQ587J8 217 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 LGALS9CQ6DKI2 356 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 TMEM256Q8N2U0 113 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 OR2T35Q8NGX2 323 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 AGPAT4-IT1Q9H0P7 198 aa11.39□□□□□ -0.59
ITGB1-210ENST00000474568 KMT2AQ03164 3969 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 A0A1W2PPV4 95 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 H7BYZ3 331 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 DEFB130BP0DP73 79 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 DEFB130AP0DP74 79 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 M6PRP20645 277 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 ZNF266Q14584 549 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 VGLL1Q99990 258 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 Q9H3A6 140 aa11.38□□□□□ -0.59
ITGB1-210ENST00000474568 ATP6V0CP27449 155 aa11.37□□□□□ -0.59
ITGB1-210ENST00000474568 TCTAP57738 103 aa11.37□□□□□ -0.59
ITGB1-210ENST00000474568 BTN1A1Q13410 526 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms