RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 C18orf15Q96N68 181 aa11.53□□□□□ -0.56
SAMM50-203ENST00000474323 CHAC1Q9BUX1 264 aa11.53□□□□□ -0.56
SAMM50-203ENST00000474323 DKK2Q9UBU2 259 aa11.53□□□□□ -0.56
SAMM50-203ENST00000474323 TRAV26-1A0A087WT03 109 aa11.52□□□□□ -0.57
SAMM50-203ENST00000474323 SRSF1Q07955 248 aaKnown RBP eCLIP11.52□□□□□ -0.57
SAMM50-203ENST00000474323 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
SAMM50-203ENST00000474323 FAM57AQ8TBR7 257 aa11.52□□□□□ -0.57
SAMM50-203ENST00000474323 CADP27708 2225 aa11.52□□□□□ -0.57
SAMM50-203ENST00000474323 BRI3O95415 125 aa11.52□□□□□ -0.57
SAMM50-203ENST00000474323 PRR30Q53SZ7 412 aaPredicted RBP11.52□□□□□ -0.57
SAMM50-203ENST00000474323 CEND1Q8N111 149 aa11.52□□□□□ -0.57
SAMM50-203ENST00000474323 TMEM75Q8N9X5 138 aa11.52□□□□□ -0.57
SAMM50-203ENST00000474323 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.57
SAMM50-203ENST00000474323 NHP2Q9NX24 153 aaKnown RBP11.52□□□□□ -0.57
SAMM50-203ENST00000474323 TMEM14CQ9P0S9 112 aa11.52□□□□□ -0.57
SAMM50-203ENST00000474323 NBASA2RRP1 2371 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 IGLL5B9A064 214 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 K7EQM0 130 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 K7ERJ3 54 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 CRYBA4P53673 196 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 ZNF502Q8TBZ5 544 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 RITA1Q96K30 269 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 ZMAT4Q9H898 229 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 TANC2Q9HCD6 1990 aa11.51□□□□□ -0.57
SAMM50-203ENST00000474323 ETDBQ3ZM63 59 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 OR4C13Q8NGP0 309 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 WI2-2373I1.2A0A1W2PRP0 233 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.5□□□□□ -0.57
SAMM50-203ENST00000474323 TPRP12270 2363 aaKnown RBP11.5□□□□□ -0.57
SAMM50-203ENST00000474323 FXYD7P58549 80 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 C10orf55Q5SWW7 151 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 SH2D6Q7Z4S9 175 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 EXOC3-AS1Q8N2X6 119 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 ZNRD1Q9P1U0 126 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 HHLA3Q9XRX5 114 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 HIGD1AQ9Y241 93 aa11.5□□□□□ -0.57
SAMM50-203ENST00000474323 TRBV25-1A0A075B6N4 114 aa11.49□□□□□ -0.57
SAMM50-203ENST00000474323 IGKV2D-26A0A0A0MRZ7 120 aa11.49□□□□□ -0.57
SAMM50-203ENST00000474323 IGLV1-44P01699 117 aa11.49□□□□□ -0.57
SAMM50-203ENST00000474323 PVRIGQ6DKI7 326 aa11.49□□□□□ -0.57
SAMM50-203ENST00000474323 ZNF474Q6S9Z5 364 aaPredicted RBP11.49□□□□□ -0.57
SAMM50-203ENST00000474323 Q71RC1 249 aaPredicted RBP11.49□□□□□ -0.57
SAMM50-203ENST00000474323 AMN1Q8IY45 258 aa11.49□□□□□ -0.57
SAMM50-203ENST00000474323 DSCAMO60469 2012 aa11.49□□□□□ -0.57
SAMM50-203ENST00000474323 PRRG2O14669 202 aa11.49□□□□□ -0.57
SAMM50-203ENST00000474323 GFRALQ6UXV0 394 aa11.49□□□□□ -0.57
SAMM50-203ENST00000474323 MRPL16Q9NX20 251 aaKnown RBP11.49□□□□□ -0.57
SAMM50-203ENST00000474323 H3BMG7 143 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 THBDP07204 575 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 HLA-DRB4P13762 266 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 TNFRSF1AP19438 455 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 CRIP1P50238 77 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 MRPL51Q4U2R6 128 aaKnown RBP11.48□□□□□ -0.57
SAMM50-203ENST00000474323 GAGE13Q4V321 117 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 SPRNQ5BIV9 151 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 RUSC1-AS1Q66K80 236 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 ZNF562Q6V9R5 426 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 ARPC1AQ92747 370 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 GEMIN7Q9H840 131 aaKnown RBP11.48□□□□□ -0.57
SAMM50-203ENST00000474323 PSG8Q9UQ74 426 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 A0A1W2PPI3 338 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 EVI2AP22794 236 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 UCNP55089 124 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 TAL2Q16559 108 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 DUX4L9Q6RFH8 374 aaPredicted RBP11.48□□□□□ -0.57
SAMM50-203ENST00000474323 LYZL1Q6UWQ5 148 aa11.48□□□□□ -0.57
SAMM50-203ENST00000474323 NBEAQ8NFP9 2946 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 ARL3P36405 182 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 LINC01559Q495D7 138 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 FAM201AQ5SY85 155 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 ITPR1Q14643 2758 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 IGHV1-18A0A0C4DH31 117 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 TMEM213A2RRL7 107 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 SCGB2A1O75556 95 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 CKS2P33552 79 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 GATA4P43694 442 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 ICE1Q9Y2F5 2266 aa11.47□□□□□ -0.57
SAMM50-203ENST00000474323 NAV3Q8IVL0 2385 aa11.46□□□□□ -0.57
SAMM50-203ENST00000474323 IGKCP01834 107 aa11.46□□□□□ -0.57
SAMM50-203ENST00000474323 TTC9CQ8N5M4 171 aa11.46□□□□□ -0.57
SAMM50-203ENST00000474323 GAFA1Q96PS6 74 aa11.46□□□□□ -0.57
SAMM50-203ENST00000474323 SLC25A39Q9BZJ4 359 aaPredicted RBP11.46□□□□□ -0.57
SAMM50-203ENST00000474323 PGPEP1Q9NXJ5 209 aa11.46□□□□□ -0.57
SAMM50-203ENST00000474323 PRO0461Q9UI25 63 aa11.46□□□□□ -0.57
SAMM50-203ENST00000474323 NPIPB5A8MRT5 1133 aa11.46□□□□□ -0.58
SAMM50-203ENST00000474323 IGLV2-23P01705 113 aa11.46□□□□□ -0.58
SAMM50-203ENST00000474323 LYPD1Q8N2G4 141 aa11.46□□□□□ -0.58
SAMM50-203ENST00000474323 TTTY13Q9BZ97 58 aa11.46□□□□□ -0.58
SAMM50-203ENST00000474323 SLC25A15Q9Y619 301 aa11.46□□□□□ -0.58
SAMM50-203ENST00000474323 PLCE1Q9P212 2302 aa11.46□□□□□ -0.58
SAMM50-203ENST00000474323 ADGRG4Q8IZF6 3080 aa11.45□□□□□ -0.58
SAMM50-203ENST00000474323 LINC01546A6NGU7 62 aa11.45□□□□□ -0.58
SAMM50-203ENST00000474323 NPYP01303 97 aa11.45□□□□□ -0.58
SAMM50-203ENST00000474323 ATP5G2Q06055 141 aa11.45□□□□□ -0.58
SAMM50-203ENST00000474323 MSMPQ1L6U9 139 aa11.45□□□□□ -0.58
SAMM50-203ENST00000474323 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
SAMM50-203ENST00000474323 KLF17Q5JT82 389 aaPredicted RBP11.45□□□□□ -0.58
SAMM50-203ENST00000474323 HCP5Q6MZN7 132 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms