RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 FAM231AP0DMU4 169 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 FAM231CP0DMU5 169 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 HTN1P15515 57 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 CDKN1BP46527 198 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 GCSAMLQ5JQS6 135 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 POM121L12Q8N7R1 296 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 THAP6Q8TBB0 222 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 NPCDR1Q9BY65 106 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 NMES1Q9C002 83 aa14.08□□□□□ -0.16
TMEM54-204ENST00000474144 TSPOP30536 169 aa14.07□□□□□ -0.16
TMEM54-204ENST00000474144 OR5C1Q8NGR4 320 aa14.07□□□□□ -0.16
TMEM54-204ENST00000474144 DEFB130BP0DP73 79 aa14.06□□□□□ -0.16
TMEM54-204ENST00000474144 DEFB130AP0DP74 79 aa14.06□□□□□ -0.16
TMEM54-204ENST00000474144 H2BFSP57053 126 aa14.06□□□□□ -0.16
TMEM54-204ENST00000474144 TAS2R60P59551 318 aa14.06□□□□□ -0.16
TMEM54-204ENST00000474144 TMEM88Q6PEY1 159 aa14.06□□□□□ -0.16
TMEM54-204ENST00000474144 TMEM256Q8N2U0 113 aa14.06□□□□□ -0.16
TMEM54-204ENST00000474144 OR10J6PQ8NGY7 276 aa14.06□□□□□ -0.16
TMEM54-204ENST00000474144 FAM210BQ96KR6 192 aa14.06□□□□□ -0.16
TMEM54-204ENST00000474144 LYRM9A8MSI8 78 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 E5RGE8 158 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 J3KRW8 73 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 PRAF2O60831 178 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 RLN2P04090 185 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 PYYP10082 97 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 GUK1Q16774 197 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 MARVELD1Q9BSK0 173 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 DNAH17Q9UFH2 4485 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 HECTD4Q9Y4D8 3996 aa14.05□□□□□ -0.16
TMEM54-204ENST00000474144 TRBV19A0A075B6N1 114 aa14.04□□□□□ -0.16
TMEM54-204ENST00000474144 MPDU1O75352 247 aa14.04□□□□□ -0.16
TMEM54-204ENST00000474144 CT45A10P0DMU9 189 aa14.04□□□□□ -0.16
TMEM54-204ENST00000474144 CLINT1Q14677 625 aa14.04□□□□□ -0.16
TMEM54-204ENST00000474144 GFI1BQ5VTD9 330 aa14.04□□□□□ -0.16
TMEM54-204ENST00000474144 SLC25A31Q9H0C2 315 aa14.04□□□□□ -0.16
TMEM54-204ENST00000474144 M0R2N4 97 aa14.03□□□□□ -0.16
TMEM54-204ENST00000474144 M0R3E3 92 aa14.03□□□□□ -0.16
TMEM54-204ENST00000474144 ZNF253O75346 499 aa14.03□□□□□ -0.16
TMEM54-204ENST00000474144 NDUFB4O95168 129 aa14.03□□□□□ -0.16
TMEM54-204ENST00000474144 C16orf74Q96GX8 76 aa14.03□□□□□ -0.16
TMEM54-204ENST00000474144 SLC25A2Q9BXI2 301 aa14.03□□□□□ -0.16
TMEM54-204ENST00000474144 TMEM14CQ9P0S9 112 aa14.03□□□□□ -0.16
TMEM54-204ENST00000474144 NPIPB6E9PJ23 425 aa14.02□□□□□ -0.17
TMEM54-204ENST00000474144 HIST1H1EP10412 219 aaKnown RBP14.02□□□□□ -0.17
TMEM54-204ENST00000474144 MIR17HGQ75NE6 70 aa14.02□□□□□ -0.17
TMEM54-204ENST00000474144 UBE2DNLQ8IWF7 75 aa14.02□□□□□ -0.17
TMEM54-204ENST00000474144 RNASE8Q8TDE3 154 aaKnown RBP14.02□□□□□ -0.17
TMEM54-204ENST00000474144 BLNKQ8WV28 456 aa14.02□□□□□ -0.17
TMEM54-204ENST00000474144 PPP1R1CQ8WVI7 109 aa14.02□□□□□ -0.17
TMEM54-204ENST00000474144 H7BYZ3 331 aa14.01□□□□□ -0.17
TMEM54-204ENST00000474144 CYCSP99999 105 aaKnown RBP14.01□□□□□ -0.17
TMEM54-204ENST00000474144 ERCC8Q13216 396 aa14.01□□□□□ -0.17
TMEM54-204ENST00000474144 EXOC3-AS1Q8N2X6 119 aa14.01□□□□□ -0.17
TMEM54-204ENST00000474144 FAM167A-AS1Q96KT0 104 aa14.01□□□□□ -0.17
TMEM54-204ENST00000474144 WDR61Q9GZS3 305 aaKnown RBP14.01□□□□□ -0.17
TMEM54-204ENST00000474144 NOP10Q9NPE3 64 aaKnown RBP14.01□□□□□ -0.17
TMEM54-204ENST00000474144 SSNA1O43805 119 aa14□□□□□ -0.17
TMEM54-204ENST00000474144 TMEM263Q8WUH6 116 aaKnown RBP14□□□□□ -0.17
TMEM54-204ENST00000474144 C20orf144Q9BQM9 153 aa14□□□□□ -0.17
TMEM54-204ENST00000474144 TIMM9Q9Y5J7 89 aa14□□□□□ -0.17
TMEM54-204ENST00000474144 TIMM8BQ9Y5J9 83 aaPredicted RBP14□□□□□ -0.17
TMEM54-204ENST00000474144 IGLV2-18A0A075B6J9 118 aa13.99□□□□□ -0.17
TMEM54-204ENST00000474144 TRAV12-3A0A0B4J271 114 aa13.99□□□□□ -0.17
TMEM54-204ENST00000474144 F5H768 121 aa13.99□□□□□ -0.17
TMEM54-204ENST00000474144 LEPP41159 167 aa13.99□□□□□ -0.17
TMEM54-204ENST00000474144 DEFA1P59665 94 aa13.99□□□□□ -0.17
TMEM54-204ENST00000474144 DEFA3P59666 94 aa13.99□□□□□ -0.17
TMEM54-204ENST00000474144 MRPL53Q96EL3 112 aaKnown RBP13.99□□□□□ -0.17
TMEM54-204ENST00000474144 MPC2O95563 127 aa13.98□□□□□ -0.17
TMEM54-204ENST00000474144 ZNF493Q6ZR52 646 aa13.98□□□□□ -0.17
TMEM54-204ENST00000474144 ODF3Q96PU9 254 aa13.98□□□□□ -0.17
TMEM54-204ENST00000474144 HERC2O95714 4834 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 CBY3A6NI87 242 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 ATP5G1P05496 136 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 ATP5G3P48201 142 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 PDE6HQ13956 83 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 ICAM4Q14773 271 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 AGPAT4-IT1Q9H0P7 198 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 HSPB11Q9Y547 144 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 NACAE9PAV3 2078 aa13.97□□□□□ -0.17
TMEM54-204ENST00000474144 FAM122CQ6P4D5 195 aa13.96□□□□□ -0.17
TMEM54-204ENST00000474144 CCDC28AQ8IWP9 274 aa13.96□□□□□ -0.17
TMEM54-204ENST00000474144 C15orf53Q8NAA6 179 aa13.96□□□□□ -0.17
TMEM54-204ENST00000474144 ATP5SQ99766 215 aa13.96□□□□□ -0.17
TMEM54-204ENST00000474144 SMIM3Q9BZL3 60 aa13.96□□□□□ -0.17
TMEM54-204ENST00000474144 OR51M1Q9H341 326 aa13.96□□□□□ -0.17
TMEM54-204ENST00000474144 PRELID1Q9Y255 219 aa13.96□□□□□ -0.17
TMEM54-204ENST00000474144 IGKV2-40A0A087WW87 121 aaPredicted RBP13.95□□□□□ -0.18
TMEM54-204ENST00000474144 RTL8CO15255 209 aa13.95□□□□□ -0.18
TMEM54-204ENST00000474144 IGKV2D-40P01614 121 aaPredicted RBP13.95□□□□□ -0.18
TMEM54-204ENST00000474144 OR10J4P0C629 311 aa13.95□□□□□ -0.18
TMEM54-204ENST00000474144 NBEAP1P0C6P0 100 aa13.95□□□□□ -0.18
TMEM54-204ENST00000474144 LGALS9BQ3B8N2 356 aa13.95□□□□□ -0.18
TMEM54-204ENST00000474144 RNF212Q495C1 297 aa13.95□□□□□ -0.18
TMEM54-204ENST00000474144 FXYD5Q96DB9 178 aa13.95□□□□□ -0.18
TMEM54-204ENST00000474144 FAM19A4Q96LR4 140 aa13.95□□□□□ -0.18
TMEM54-204ENST00000474144 FUT9Q9Y231 359 aa13.95□□□□□ -0.18
TMEM54-204ENST00000474144 DYNC1H1Q14204 4646 aaKnown RBP13.95□□□□□ -0.18
TMEM54-204ENST00000474144 C17orf112F2Z3M2 114 aa13.94□□□□□ -0.18
TMEM54-204ENST00000474144 NUDT3O95989 172 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms