RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 MAP1LC3BQ9GZQ8 125 aa14.69□□□□□ -0.06
APP-215ENST00000474136 SMPXQ9UHP9 88 aa14.69□□□□□ -0.06
APP-215ENST00000474136 PKD1P98161 4303 aa14.69□□□□□ -0.06
APP-215ENST00000474136 IGHV7-4-1A0A0J9YVY3 117 aa14.68□□□□□ -0.06
APP-215ENST00000474136 PPT1P50897 306 aa14.68□□□□□ -0.06
APP-215ENST00000474136 ZNF726P1Q15940 193 aa14.68□□□□□ -0.06
APP-215ENST00000474136 OR8I2Q8N0Y5 310 aa14.68□□□□□ -0.06
APP-215ENST00000474136 TMEM14CQ9P0S9 112 aa14.68□□□□□ -0.06
APP-215ENST00000474136 NMBP08949 121 aa14.67□□□□□ -0.06
APP-215ENST00000474136 LCN15Q6UWW0 184 aa14.67□□□□□ -0.06
APP-215ENST00000474136 LYPD6BQ8NI32 183 aa14.67□□□□□ -0.06
APP-215ENST00000474136 TMEM167BQ9NRX6 74 aa14.67□□□□□ -0.06
APP-215ENST00000474136 IGKV3-7A0A075B6H7 116 aa14.66□□□□□ -0.06
APP-215ENST00000474136 PRSS29PA6NIE9 313 aa14.66□□□□□ -0.06
APP-215ENST00000474136 OR7C2O60412 319 aa14.66□□□□□ -0.06
APP-215ENST00000474136 CA1P00915 261 aaPredicted RBP14.66□□□□□ -0.06
APP-215ENST00000474136 PSMB3P49720 205 aa14.66□□□□□ -0.06
APP-215ENST00000474136 MEOX2P50222 304 aa14.66□□□□□ -0.06
APP-215ENST00000474136 SCRT1Q9BWW7 348 aa14.66□□□□□ -0.06
APP-215ENST00000474136 SLC25A2Q9BXI2 301 aa14.66□□□□□ -0.06
APP-215ENST00000474136 OR51M1Q9H341 326 aa14.66□□□□□ -0.06
APP-215ENST00000474136 HELTA6NFD8 242 aa14.66□□□□□ -0.06
APP-215ENST00000474136 RTL8CO15255 209 aa14.66□□□□□ -0.06
APP-215ENST00000474136 GALR1P47211 349 aa14.66□□□□□ -0.06
APP-215ENST00000474136 GUK1Q16774 197 aa14.66□□□□□ -0.06
APP-215ENST00000474136 SPATA31B1PQ5VZV4 182 aa14.66□□□□□ -0.06
APP-215ENST00000474136 C16orf54Q6UWD8 224 aa14.66□□□□□ -0.06
APP-215ENST00000474136 FAM167A-AS1Q96KT0 104 aa14.66□□□□□ -0.06
APP-215ENST00000474136 PAXXQ9BUH6 204 aa14.66□□□□□ -0.06
APP-215ENST00000474136 RHPN1-AS1Q9BWJ2 59 aa14.66□□□□□ -0.06
APP-215ENST00000474136 HSPG2P98160 4391 aa14.65□□□□□ -0.06
APP-215ENST00000474136 IGHV3-49A0A0A0MS15 119 aa14.65□□□□□ -0.06
APP-215ENST00000474136 C11orf94C9JXX5 98 aa14.65□□□□□ -0.06
APP-215ENST00000474136 CHEK1O14757 476 aa14.65□□□□□ -0.06
APP-215ENST00000474136 ARL14EPLP0DKL9 152 aa14.65□□□□□ -0.06
APP-215ENST00000474136 MORN5Q5VZ52 161 aa14.65□□□□□ -0.06
APP-215ENST00000474136 HRH4Q9H3N8 390 aa14.65□□□□□ -0.06
APP-215ENST00000474136 IGHV4-4A0A075B6R2 117 aa14.64□□□□□ -0.07
APP-215ENST00000474136 TRAV5A0A0B4J249 113 aa14.64□□□□□ -0.07
APP-215ENST00000474136 HMGB3O15347 200 aaKnown RBP14.64□□□□□ -0.07
APP-215ENST00000474136 HIST1H1EP10412 219 aaKnown RBP14.64□□□□□ -0.07
APP-215ENST00000474136 GCHFRP30047 84 aa14.64□□□□□ -0.07
APP-215ENST00000474136 TAGLN2P37802 199 aaKnown RBP14.64□□□□□ -0.07
APP-215ENST00000474136 LEMD1Q68G75 181 aa14.64□□□□□ -0.07
APP-215ENST00000474136 SSX7Q7RTT5 188 aa14.64□□□□□ -0.07
APP-215ENST00000474136 GBGT1Q8N5D6 347 aa14.64□□□□□ -0.07
APP-215ENST00000474136 Q8NAQ8 132 aa14.64□□□□□ -0.07
APP-215ENST00000474136 M0R2N4 97 aa14.63□□□□□ -0.07
APP-215ENST00000474136 IFNA1P01562 189 aa14.63□□□□□ -0.07
APP-215ENST00000474136 RBMY1A1P0DJD3 496 aaKnown RBP14.63□□□□□ -0.07
APP-215ENST00000474136 RBMY1CP0DJD4 496 aa14.63□□□□□ -0.07
APP-215ENST00000474136 HLA-DMBP28068 263 aa14.63□□□□□ -0.07
APP-215ENST00000474136 RBMY1FQ15415 496 aaKnown RBP14.63□□□□□ -0.07
APP-215ENST00000474136 SAMD13Q5VXD3 122 aa14.63□□□□□ -0.07
APP-215ENST00000474136 IQCF2Q8IXL9 164 aa14.63□□□□□ -0.07
APP-215ENST00000474136 GLMPQ8WWB7 406 aa14.63□□□□□ -0.07
APP-215ENST00000474136 APOHP02749 345 aaPredicted RBP14.62□□□□□ -0.07
APP-215ENST00000474136 NBEAP1P0C6P0 100 aa14.62□□□□□ -0.07
APP-215ENST00000474136 CMC4P56277 68 aaPredicted RBP14.62□□□□□ -0.07
APP-215ENST00000474136 UBE2L3P68036 154 aaKnown RBP14.62□□□□□ -0.07
APP-215ENST00000474136 SIGLEC15Q6ZMC9 328 aa14.62□□□□□ -0.07
APP-215ENST00000474136 Q6ZTC4 211 aa14.62□□□□□ -0.07
APP-215ENST00000474136 SUN5Q8TC36 379 aa14.62□□□□□ -0.07
APP-215ENST00000474136 MANBALQ9NQG1 85 aa14.62□□□□□ -0.07
APP-215ENST00000474136 ARL2-SNX15V9GYD0 113 aa14.62□□□□□ -0.07
APP-215ENST00000474136 IGHV3OR16-13A0A075B7E8 117 aa14.61□□□□□ -0.07
APP-215ENST00000474136 IGHV3-74A0A0B4J1X5 117 aa14.61□□□□□ -0.07
APP-215ENST00000474136 IGHV4-28A0A0C4DH34 117 aa14.61□□□□□ -0.07
APP-215ENST00000474136 FGF8P55075 233 aaPredicted RBP14.61□□□□□ -0.07
APP-215ENST00000474136 PDE6HQ13956 83 aa14.61□□□□□ -0.07
APP-215ENST00000474136 NKX6-2Q9C056 277 aaPredicted RBP14.61□□□□□ -0.07
APP-215ENST00000474136 A0A087X0K7 114 aa14.6□□□□□ -0.07
APP-215ENST00000474136 IGHV3-66A0A0C4DH42 116 aa14.6□□□□□ -0.07
APP-215ENST00000474136 MRPS12O15235 138 aaKnown RBP14.6□□□□□ -0.07
APP-215ENST00000474136 ZNF253O75346 499 aa14.6□□□□□ -0.07
APP-215ENST00000474136 IGLC2P0DOY2 106 aa14.6□□□□□ -0.07
APP-215ENST00000474136 LYPD1Q8N2G4 141 aa14.6□□□□□ -0.07
APP-215ENST00000474136 FXYD5Q96DB9 178 aa14.6□□□□□ -0.07
APP-215ENST00000474136 ZNF503Q96F45 646 aa14.6□□□□□ -0.07
APP-215ENST00000474136 MED9Q9NWA0 146 aa14.6□□□□□ -0.07
APP-215ENST00000474136 TRAV10A0A0B4J240 114 aa14.59□□□□□ -0.07
APP-215ENST00000474136 OR10J4P0C629 311 aa14.59□□□□□ -0.07
APP-215ENST00000474136 PYYP10082 97 aa14.59□□□□□ -0.07
APP-215ENST00000474136 PAFAH1B2P68402 229 aa14.59□□□□□ -0.07
APP-215ENST00000474136 FAM90A2PQ658T7 463 aa14.59□□□□□ -0.07
APP-215ENST00000474136 TCF24Q7RTU0 167 aa14.59□□□□□ -0.07
APP-215ENST00000474136 ZNF575Q86XF7 245 aa14.59□□□□□ -0.07
APP-215ENST00000474136 TXNDC17Q9BRA2 123 aa14.59□□□□□ -0.07
APP-215ENST00000474136 CLEC5AQ9NY25 188 aa14.59□□□□□ -0.07
APP-215ENST00000474136 A0A1B0GV50 99 aa14.58□□□□□ -0.08
APP-215ENST00000474136 A0A1W2PRE2 83 aa14.58□□□□□ -0.08
APP-215ENST00000474136 RPL11P62913 178 aaKnown RBP14.58□□□□□ -0.08
APP-215ENST00000474136 PSG9Q00887 426 aa14.58□□□□□ -0.08
APP-215ENST00000474136 PCNPQ8WW12 178 aaKnown RBP14.58□□□□□ -0.08
APP-215ENST00000474136 TRBV19A0A075B6N1 114 aa14.57□□□□□ -0.08
APP-215ENST00000474136 EIF3GO75821 320 aaKnown RBP eCLIP14.57□□□□□ -0.08
APP-215ENST00000474136 GIG44P09565 113 aaPredicted RBP14.57□□□□□ -0.08
APP-215ENST00000474136 DEFB131AP59861 70 aa14.57□□□□□ -0.08
APP-215ENST00000474136 CCL20P78556 96 aa14.57□□□□□ -0.08
APP-215ENST00000474136 POM121L12Q8N7R1 296 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms