RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RPL19P84098 196 aaKnown RBP4.76□□□□□ -1.65
CLK1-210ENST00000473565 FOXL1Q12952 345 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 ERCC8Q13216 396 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 RPEL1Q2QD12 228 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 DEFB136Q30KP8 78 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 ZC2HC1AQ96GY0 325 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 FMC1Q96HJ9 113 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 FOXC2Q99958 501 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 NPFFR1Q9GZQ6 430 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 SRD5A3Q9H8P0 318 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 ESM1Q9NQ30 184 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 BIN3Q9NQY0 253 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 OSTCQ9NRP0 149 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 PSG8Q9UQ74 426 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 A0A1B0GUS0 222 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 H3BUA1 57 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 GATCO43716 136 aaKnown RBP4.76□□□□□ -1.65
CLK1-210ENST00000473565 ZNF705DP0CH99 300 aaPredicted RBP4.76□□□□□ -1.65
CLK1-210ENST00000473565 ZNF705BP0CI00 300 aaPredicted RBP4.76□□□□□ -1.65
CLK1-210ENST00000473565 TCF24Q7RTU0 167 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 C11orf44Q8N8P7 122 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 DUX3Q96PT4 197 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 ZNF331Q9NQX6 463 aaPredicted RBP4.76□□□□□ -1.65
CLK1-210ENST00000473565 FN1P02751 2386 aaKnown RBP4.76□□□□□ -1.65
CLK1-210ENST00000473565 TRAV8-2A0A0B4J237 113 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 C5orf52A6NGY3 159 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 DNAJC9-AS1A6NH13 148 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 RPL11P62913 178 aaKnown RBP4.76□□□□□ -1.65
CLK1-210ENST00000473565 PDE6HQ13956 83 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 S100A7AQ86SG5 101 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 TCEAL7Q9BRU2 100 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 GPR61Q9BZJ8 451 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 PEF1Q9UBV8 284 aaKnown RBP4.76□□□□□ -1.65
CLK1-210ENST00000473565 RNF24Q9Y225 148 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 U3KQE9 123 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 A0A0G2JLM5 398 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 NDUFA4O00483 81 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 PSG3Q16557 428 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 LCN12Q6JVE5 192 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 C8orf86Q6ZUL3 223 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 TMEM190Q8WZ59 177 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 PRDM13Q9H4Q3 707 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 TMSB15BA0A087X1C1 80 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 CSN1S1P47710 185 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 CRIP1P50238 77 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 SSTP61278 116 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 PSG9Q00887 426 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 KHDC1LQ5JSQ8 128 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 C16orf54Q6UWD8 224 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 GPHB5Q86YW7 130 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 TMEM183AQ8IXX5 376 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 LYPD1Q8N2G4 141 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 GBGT1Q8N5D6 347 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 GLMPQ8WWB7 406 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 C20orf173Q96LM9 149 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 NEU1Q99519 415 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 TRAPPC1Q9Y5R8 145 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 JMJD1CQ15652 2540 aa4.75□□□□□ -1.65
CLK1-210ENST00000473565 IGHV4OR15-8A0A075B7B6 117 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 A0A087WW49 117 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 BRI3O95415 125 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 TYMSP04818 313 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 RAB4BP61018 213 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 SRSF2Q01130 221 aaKnown RBP4.74□□□□□ -1.65
CLK1-210ENST00000473565 KIAA1644Q3SXP7 199 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 ACTL10Q5JWF8 245 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 TMEM75Q8N9X5 138 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 GTSF1Q8WW33 167 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 SMIM27A0A1W2PRY6 76 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 C19orf71A6NCJ1 209 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 HIGD1CA8MV81 97 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 SNURFLB1AK76 121 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 K7EQM0 130 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 CD5LO43866 347 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 P01737 135 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 Q6ZSV7 163 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 NUP35Q8NFH5 326 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 BTF3L4Q96K17 158 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 RHPN1-AS1Q9BWJ2 59 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 A0A087X0K7 114 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 GRIFINA4D1Z8 144 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 IFITM10A6NMD0 228 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 ZNF80P51504 273 aaPredicted RBP4.74□□□□□ -1.65
CLK1-210ENST00000473565 SYNJ2BPP57105 145 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 TCTEX1D4Q5JR98 221 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 Q6ZQT7 251 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 WFDC3Q8IUB2 231 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 KLHDC1Q8N7A1 406 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 OR2D3Q8NGH3 330 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 DAZAP1Q96EP5 407 aaKnown RBP4.74□□□□□ -1.65
CLK1-210ENST00000473565 GRAMD2BQ96HH9 432 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 PGLYRP4Q96LB8 373 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 C16orf92Q96LL3 132 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 RPP21Q9H633 154 aaKnown RBP4.74□□□□□ -1.65
CLK1-210ENST00000473565 TENM1Q9UKZ4 2725 aa4.74□□□□□ -1.65
CLK1-210ENST00000473565 MUC21A0A0G2JKD1 596 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 IGHV7-4-1A0A0J9YVY3 117 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 MUC21A0A140T8X8 626 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 F6UB75 175 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms