RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PRM2P04554 102 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 CD2P06729 351 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 SPINK8P0C7L1 97 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 PATE4P0C8F1 98 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 ZNF32P17041 273 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 ZNF136P52737 540 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
RTF1-203ENST00000473214 FGF12P61328 243 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 EIF5AP63241 154 aaKnown RBP4.28□□□□□ -1.72
RTF1-203ENST00000473214 C22orf39Q6P5X5 142 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 ZNF880Q6PDB4 577 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 IZUMO2Q6UXV1 221 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 TIFABQ6ZNK6 161 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 SLC25A42Q86VD7 318 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 DAND5Q8N907 189 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
RTF1-203ENST00000473214 PLPP5Q8NEB5 264 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 C15orf40Q8WUR7 153 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 TMEM190Q8WZ59 177 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 SNRNP25Q9BV90 132 aaKnown RBP4.28□□□□□ -1.72
RTF1-203ENST00000473214 HEXA-AS1Q9H8Q6 139 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 ZNF286AQ9HBT8 521 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 MPC1Q9Y5U8 109 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 BOD1L1Q8NFC6 3051 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 C2CD3Q4AC94 2353 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 ITPR3Q14573 2671 aa4.28□□□□□ -1.73
RTF1-203ENST00000473214 USP9YO00507 2555 aaPredicted RBP4.27□□□□□ -1.73
RTF1-203ENST00000473214 LRRK2Q5S007 2527 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 BSNQ9UPA5 3926 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 BUB1B-PAK6H3BSN5 160 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 SERF1AO75920 110 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 CSN1S1P47710 185 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 NUDT2P50583 147 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 UBA52P62987 128 aaKnown RBP4.27□□□□□ -1.73
RTF1-203ENST00000473214 UBE2BP63146 152 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 HBBP68871 147 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 BTG2P78543 158 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 QRFPP83859 136 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 TTC9CQ8N5M4 171 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 WFDC11Q8NEX6 87 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 TMEM158Q8WZ71 300 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 RNASE6Q93091 150 aaKnown RBP4.27□□□□□ -1.73
RTF1-203ENST00000473214 CHAC1Q9BUX1 264 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 C6orf106Q9H6K1 298 aaPredicted RBP4.27□□□□□ -1.73
RTF1-203ENST00000473214 FGF22Q9HCT0 170 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 RPRMQ9NS64 109 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 IL36BQ9NZH7 164 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 MDFICQ9P1T7 246 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 CELA1Q9UNI1 258 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 DENND4CQ5VZ89 1909 aa4.27□□□□□ -1.73
RTF1-203ENST00000473214 ANK1P16157 1881 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 IGHV3-72A0A0B4J1Y9 119 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 A0A1B0GW54 56 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 M0R129 80 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 KLF7O75840 302 aaPredicted RBP4.26□□□□□ -1.73
RTF1-203ENST00000473214 TNFP01375 233 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 ZNF19P17023 458 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 CXCL5P42830 114 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 LINC00205P59089 165 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 GNB1P62873 340 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 KLF9Q13886 244 aaPredicted RBP4.26□□□□□ -1.73
RTF1-203ENST00000473214 SLC35E3Q7Z769 313 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 LINC00471Q8N535 108 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 RNF182Q8N6D2 247 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 OR8A1Q8NGG7 326 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 LCN9Q8WX39 176 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 RBPMSQ93062 196 aaKnown RBP4.26□□□□□ -1.73
RTF1-203ENST00000473214 DPH3Q96FX2 82 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 MRPL32Q9BYC8 188 aaKnown RBP4.26□□□□□ -1.73
RTF1-203ENST00000473214 SLC39A9Q9NUM3 307 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 CREBBPQ92793 2442 aa4.26□□□□□ -1.73
RTF1-203ENST00000473214 IGLV7-46A0A075B6I9 117 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 A0A0D9SEW6 157 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 A0A0J9YW62 118 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 ZNF324O75467 553 aaPredicted RBP4.25□□□□□ -1.73
RTF1-203ENST00000473214 LY6G6DO95868 133 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 PYYP10082 97 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 IFITM1P13164 125 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 TGFBR1P36897 503 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 UBE2AP49459 152 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 DYNLT3P51808 116 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 TMEM258P61165 79 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 C6orf52Q5T4I8 152 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 MRPL54Q6P161 138 aaKnown RBP4.25□□□□□ -1.73
RTF1-203ENST00000473214 ZNF101Q8IZC7 436 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 SVBPQ8N300 66 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 KCNRGQ8N5I3 272 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 OR10G2Q8NGC3 310 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 LMO3Q8TAP4 145 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 COMMD3Q9UBI1 195 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 ITPR2Q14571 2701 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 AHCTF1Q8WYP5 2266 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 DNHD1Q96M86 4753 aa4.25□□□□□ -1.73
RTF1-203ENST00000473214 ZNF638Q14966 1978 aaKnown RBP4.24□□□□□ -1.73
RTF1-203ENST00000473214 IGHV3OR15-7A0A075B7D8 119 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 IFITM10A6NMD0 228 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 SOCS3O14543 225 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms