RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 A0A096LNJ9 63 aa16.56■□□□□ 0.24
COL18A1-207ENST00000473212 Q6AWC8 147 aa16.56■□□□□ 0.24
COL18A1-207ENST00000473212 C2orf91Q6ZV80 131 aa16.56■□□□□ 0.24
COL18A1-207ENST00000473212 RNF5Q99942 180 aa16.56■□□□□ 0.24
COL18A1-207ENST00000473212 IGHV3OR16-8A0A075B7F1 116 aa16.55■□□□□ 0.24
COL18A1-207ENST00000473212 SRSF8Q9BRL6 282 aaKnown RBP16.55■□□□□ 0.24
COL18A1-207ENST00000473212 CELSR1Q9NYQ6 3014 aa16.55■□□□□ 0.24
COL18A1-207ENST00000473212 WI2-2373I1.2A0A1W2PRP0 233 aa16.55■□□□□ 0.24
COL18A1-207ENST00000473212 ZNF493Q6ZR52 646 aa16.55■□□□□ 0.24
COL18A1-207ENST00000473212 AMN1Q8IY45 258 aa16.55■□□□□ 0.24
COL18A1-207ENST00000473212 SIGLEC8Q9NYZ4 499 aa16.55■□□□□ 0.24
COL18A1-207ENST00000473212 FXYD7P58549 80 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 HES1Q14469 280 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 RNF151Q2KHN1 245 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 TMEM189A5PLL7 270 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 CD5LO43866 347 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 GNG7O60262 68 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 CDKN1BP46527 198 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 FOXC1Q12948 553 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 AAMDCQ9H7C9 122 aa16.54■□□□□ 0.24
COL18A1-207ENST00000473212 NBR2O15453 112 aa16.53■□□□□ 0.24
COL18A1-207ENST00000473212 NBL1P41271 181 aa16.53■□□□□ 0.24
COL18A1-207ENST00000473212 NDPQ00604 133 aa16.53■□□□□ 0.24
COL18A1-207ENST00000473212 IGFL4Q6B9Z1 124 aa16.53■□□□□ 0.24
COL18A1-207ENST00000473212 CFHR4Q92496 578 aa16.53■□□□□ 0.24
COL18A1-207ENST00000473212 PSG9Q00887 426 aa16.53■□□□□ 0.24
COL18A1-207ENST00000473212 TMEM190Q8WZ59 177 aa16.53■□□□□ 0.24
COL18A1-207ENST00000473212 PRELID3AQ96N28 172 aa16.53■□□□□ 0.24
COL18A1-207ENST00000473212 SH2D1AO60880 128 aa16.52■□□□□ 0.24
COL18A1-207ENST00000473212 DYNAPQ8N1N2 210 aa16.52■□□□□ 0.24
COL18A1-207ENST00000473212 PIP4P2Q8N4L2 257 aa16.52■□□□□ 0.24
COL18A1-207ENST00000473212 IGHV3-35A0A0C4DH35 117 aa16.52■□□□□ 0.23
COL18A1-207ENST00000473212 ANKRD39Q53RE8 183 aa16.52■□□□□ 0.23
COL18A1-207ENST00000473212 FAM104BQ5XKR9 115 aa16.52■□□□□ 0.23
COL18A1-207ENST00000473212 VPS13CQ709C8 3753 aa16.52■□□□□ 0.23
COL18A1-207ENST00000473212 IGKV2-40A0A087WW87 121 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-207ENST00000473212 IGKV2D-40P01614 121 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-207ENST00000473212 TCTAP57738 103 aa16.51■□□□□ 0.23
COL18A1-207ENST00000473212 TRAV8-6A0A0B4J262 113 aa16.51■□□□□ 0.23
COL18A1-207ENST00000473212 FANCD2OSQ96PS1 177 aa16.51■□□□□ 0.23
COL18A1-207ENST00000473212 F8W735 103 aaPredicted RBP16.5■□□□□ 0.23
COL18A1-207ENST00000473212 ORMDL3Q8N138 153 aa16.5■□□□□ 0.23
COL18A1-207ENST00000473212 VKORC1Q9BQB6 163 aa16.5■□□□□ 0.23
COL18A1-207ENST00000473212 U3KQK5 164 aa16.5■□□□□ 0.23
COL18A1-207ENST00000473212 NHLH1Q02575 133 aa16.5■□□□□ 0.23
COL18A1-207ENST00000473212 PDE6HQ13956 83 aa16.5■□□□□ 0.23
COL18A1-207ENST00000473212 RAB1BQ9H0U4 201 aa16.5■□□□□ 0.23
COL18A1-207ENST00000473212 MRPL51Q4U2R6 128 aaKnown RBP16.49■□□□□ 0.23
COL18A1-207ENST00000473212 DPM3Q9P2X0 92 aa16.49■□□□□ 0.23
COL18A1-207ENST00000473212 SMKR1H3BMG3 65 aa16.49■□□□□ 0.23
COL18A1-207ENST00000473212 FGF6P10767 208 aa16.49■□□□□ 0.23
COL18A1-207ENST00000473212 TMEM97Q5BJF2 176 aa16.49■□□□□ 0.23
COL18A1-207ENST00000473212 CST9LQ9H4G1 147 aa16.49■□□□□ 0.23
COL18A1-207ENST00000473212 CACNG7P62955 275 aa16.48■□□□□ 0.23
COL18A1-207ENST00000473212 LY6G5BQ8NDX9 201 aa16.48■□□□□ 0.23
COL18A1-207ENST00000473212 C7orf71A4D174 169 aa16.48■□□□□ 0.23
COL18A1-207ENST00000473212 HLA-DMBP28068 263 aa16.48■□□□□ 0.23
COL18A1-207ENST00000473212 UQCRFS1P47985 274 aa16.48■□□□□ 0.23
COL18A1-207ENST00000473212 MFAP4P55083 255 aa16.48■□□□□ 0.23
COL18A1-207ENST00000473212 Q8TAT8 98 aa16.47■□□□□ 0.23
COL18A1-207ENST00000473212 IGLV11-55A0A075B6I3 123 aa16.47■□□□□ 0.23
COL18A1-207ENST00000473212 NCBP2LA6PVI3 153 aaKnown RBP16.47■□□□□ 0.23
COL18A1-207ENST00000473212 NDUFA3O95167 84 aa16.47■□□□□ 0.23
COL18A1-207ENST00000473212 EGR2P11161 476 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-207ENST00000473212 NPBQ8NG41 125 aa16.47■□□□□ 0.23
COL18A1-207ENST00000473212 PEF1Q9UBV8 284 aaKnown RBP16.47■□□□□ 0.23
COL18A1-207ENST00000473212 RABAC1Q9UI14 185 aa16.47■□□□□ 0.23
COL18A1-207ENST00000473212 COL12A1Q99715 3063 aa16.46■□□□□ 0.23
COL18A1-207ENST00000473212 RPS20P60866 119 aaKnown RBP16.46■□□□□ 0.23
COL18A1-207ENST00000473212 S100A7AQ86SG5 101 aa16.46■□□□□ 0.23
COL18A1-207ENST00000473212 PRR25Q96S07 402 aa16.46■□□□□ 0.23
COL18A1-207ENST00000473212 TWIST1Q15672 202 aa16.46■□□□□ 0.22
COL18A1-207ENST00000473212 C5orf64Q2M2E5 130 aa16.46■□□□□ 0.22
COL18A1-207ENST00000473212 LGALS9BQ3B8N2 356 aa16.46■□□□□ 0.22
COL18A1-207ENST00000473212 LGALS9CQ6DKI2 356 aa16.46■□□□□ 0.22
COL18A1-207ENST00000473212 CKS2P33552 79 aa16.45■□□□□ 0.22
COL18A1-207ENST00000473212 ZNF80P51504 273 aaPredicted RBP16.45■□□□□ 0.22
COL18A1-207ENST00000473212 NPIPB5A8MRT5 1133 aa16.45■□□□□ 0.22
COL18A1-207ENST00000473212 CCL21O00585 134 aa16.45■□□□□ 0.22
COL18A1-207ENST00000473212 NPYP01303 97 aa16.45■□□□□ 0.22
COL18A1-207ENST00000473212 HBDP02042 147 aa16.45■□□□□ 0.22
COL18A1-207ENST00000473212 OCIAD2Q56VL3 154 aa16.45■□□□□ 0.22
COL18A1-207ENST00000473212 K7ENP7 123 aa16.44■□□□□ 0.22
COL18A1-207ENST00000473212 OR11H6Q8NGC7 330 aa16.44■□□□□ 0.22
COL18A1-207ENST00000473212 DPF1Q92782 380 aa16.44■□□□□ 0.22
COL18A1-207ENST00000473212 VGLL1Q99990 258 aa16.44■□□□□ 0.22
COL18A1-207ENST00000473212 C21orf62Q9NYP8 219 aa16.44■□□□□ 0.22
COL18A1-207ENST00000473212 SEC11AP67812 179 aa16.44■□□□□ 0.22
COL18A1-207ENST00000473212 PAX8Q06710 450 aa16.44■□□□□ 0.22
COL18A1-207ENST00000473212 SAPCD1Q5SSQ6 148 aa16.44■□□□□ 0.22
COL18A1-207ENST00000473212 WFDC3Q8IUB2 231 aa16.43■□□□□ 0.22
COL18A1-207ENST00000473212 FER1L6-AS1Q8NA97 138 aa16.43■□□□□ 0.22
COL18A1-207ENST00000473212 OR1N2Q8NGR9 330 aa16.43■□□□□ 0.22
COL18A1-207ENST00000473212 GAGE12BA1L429 117 aa16.43■□□□□ 0.22
COL18A1-207ENST00000473212 BOD1L2Q8IYS8 172 aa16.43■□□□□ 0.22
COL18A1-207ENST00000473212 ARPC1AQ92747 370 aa16.43■□□□□ 0.22
COL18A1-207ENST00000473212 THYN1Q9P016 225 aa16.43■□□□□ 0.22
COL18A1-207ENST00000473212 RPL7P18124 248 aaKnown RBP16.42■□□□□ 0.22
COL18A1-207ENST00000473212 CEACAM3P40198 252 aa16.42■□□□□ 0.22
COL18A1-207ENST00000473212 IFI27L1Q96BM0 104 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms