RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 IFNA5P01569 189 aa13.91□□□□□ -0.18
COMMD1-208ENST00000472729 PRB4P10163 310 aaPredicted RBP13.91□□□□□ -0.18
COMMD1-208ENST00000472729 H2BFSP57053 126 aa13.91□□□□□ -0.18
COMMD1-208ENST00000472729 SCGB1C1Q8TD33 95 aa13.91□□□□□ -0.18
COMMD1-208ENST00000472729 AAMDCQ9H7C9 122 aa13.91□□□□□ -0.18
COMMD1-208ENST00000472729 TMEM14CQ9P0S9 112 aa13.91□□□□□ -0.18
COMMD1-208ENST00000472729 SLC17A3O00476 420 aa13.9□□□□□ -0.18
COMMD1-208ENST00000472729 CRXO43186 299 aaPredicted RBP13.9□□□□□ -0.18
COMMD1-208ENST00000472729 HIST1H1EP10412 219 aaKnown RBP13.9□□□□□ -0.18
COMMD1-208ENST00000472729 TAS2R60P59551 318 aa13.9□□□□□ -0.18
COMMD1-208ENST00000472729 BLNKQ8WV28 456 aa13.9□□□□□ -0.18
COMMD1-208ENST00000472729 FAM210BQ96KR6 192 aa13.9□□□□□ -0.18
COMMD1-208ENST00000472729 HYDINQ4G0P3 5121 aa13.9□□□□□ -0.18
COMMD1-208ENST00000472729 TRBV19A0A075B6N1 114 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 LYRM9A8MSI8 78 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 ZNF253O75346 499 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 P0DMU3 169 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 FAM231AP0DMU4 169 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 FAM231CP0DMU5 169 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 OXA1LQ15070 435 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 CCDC28AQ8IWP9 274 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 SAT2Q96F10 170 aaPredicted RBP13.89□□□□□ -0.19
COMMD1-208ENST00000472729 ATP5SQ99766 215 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 WDR61Q9GZS3 305 aaKnown RBP13.89□□□□□ -0.19
COMMD1-208ENST00000472729 ZNF586Q9NXT0 402 aa13.89□□□□□ -0.19
COMMD1-208ENST00000472729 H0YIZ8 118 aa13.88□□□□□ -0.19
COMMD1-208ENST00000472729 H7BYZ3 331 aa13.88□□□□□ -0.19
COMMD1-208ENST00000472729 MPC2O95563 127 aa13.88□□□□□ -0.19
COMMD1-208ENST00000472729 RPL12P30050 165 aaKnown RBP13.88□□□□□ -0.19
COMMD1-208ENST00000472729 LEPP41159 167 aa13.88□□□□□ -0.19
COMMD1-208ENST00000472729 PDE6HQ13956 83 aa13.88□□□□□ -0.19
COMMD1-208ENST00000472729 PRELID1Q9Y255 219 aa13.88□□□□□ -0.19
COMMD1-208ENST00000472729 DEFB130BP0DP73 79 aa13.87□□□□□ -0.19
COMMD1-208ENST00000472729 DEFB130AP0DP74 79 aa13.87□□□□□ -0.19
COMMD1-208ENST00000472729 GCSAMLQ5JQS6 135 aa13.87□□□□□ -0.19
COMMD1-208ENST00000472729 C16orf74Q96GX8 76 aa13.87□□□□□ -0.19
COMMD1-208ENST00000472729 C20orf144Q9BQM9 153 aa13.87□□□□□ -0.19
COMMD1-208ENST00000472729 MRPL32Q9BYC8 188 aaKnown RBP13.87□□□□□ -0.19
COMMD1-208ENST00000472729 PLA2G2EQ9NZK7 142 aa13.87□□□□□ -0.19
COMMD1-208ENST00000472729 ALMS1Q8TCU4 4167 aa13.86□□□□□ -0.19
COMMD1-208ENST00000472729 PRAC2D3DTV9 90 aa13.86□□□□□ -0.19
COMMD1-208ENST00000472729 J3KRW8 73 aa13.86□□□□□ -0.19
COMMD1-208ENST00000472729 ZNF493Q6ZR52 646 aa13.86□□□□□ -0.19
COMMD1-208ENST00000472729 UBE2DNLQ8IWF7 75 aa13.86□□□□□ -0.19
COMMD1-208ENST00000472729 MRPL53Q96EL3 112 aaKnown RBP13.86□□□□□ -0.19
COMMD1-208ENST00000472729 OR51M1Q9H341 326 aa13.86□□□□□ -0.19
COMMD1-208ENST00000472729 HSPB11Q9Y547 144 aa13.86□□□□□ -0.19
COMMD1-208ENST00000472729 PTTG1O95997 202 aa13.85□□□□□ -0.19
COMMD1-208ENST00000472729 PYYP10082 97 aa13.85□□□□□ -0.19
COMMD1-208ENST00000472729 SMIM3Q9BZL3 60 aa13.85□□□□□ -0.19
COMMD1-208ENST00000472729 MBD2Q9UBB5 411 aa13.85□□□□□ -0.19
COMMD1-208ENST00000472729 TIMM8BQ9Y5J9 83 aaPredicted RBP13.85□□□□□ -0.19
COMMD1-208ENST00000472729 OR7C2O60412 319 aa13.84□□□□□ -0.19
COMMD1-208ENST00000472729 PRM2P04554 102 aa13.84□□□□□ -0.19
COMMD1-208ENST00000472729 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
COMMD1-208ENST00000472729 MIR17HGQ75NE6 70 aa13.84□□□□□ -0.19
COMMD1-208ENST00000472729 PAXXQ9BUH6 204 aa13.84□□□□□ -0.19
COMMD1-208ENST00000472729 SLC25A2Q9BXI2 301 aa13.84□□□□□ -0.19
COMMD1-208ENST00000472729 FUT9Q9Y231 359 aa13.84□□□□□ -0.19
COMMD1-208ENST00000472729 NPIPB6E9PJ23 425 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 AZU1P20160 251 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 CSN1S1P47710 185 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 TAS2R45P59539 299 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 FFAR4Q5NUL3 377 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 TMEM263Q8WUH6 116 aaKnown RBP13.83□□□□□ -0.2
COMMD1-208ENST00000472729 LINC00477Q96M19 166 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 ODF3Q96PU9 254 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 PARD6GQ9BYG4 376 aaPredicted RBP13.83□□□□□ -0.2
COMMD1-208ENST00000472729 MED28Q9H204 178 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 ALG5Q9Y673 324 aa13.83□□□□□ -0.2
COMMD1-208ENST00000472729 M0R3E3 92 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 OR10J4P0C629 311 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 CT45A10P0DMU9 189 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 ICAM4Q14773 271 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 TMEM78Q5T7P6 136 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 GFI1BQ5VTD9 330 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 FAM122CQ6P4D5 195 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 EXOC3-AS1Q8N2X6 119 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 POM121L12Q8N7R1 296 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 RNF141Q8WVD5 230 aa13.82□□□□□ -0.2
COMMD1-208ENST00000472729 TRAV12-3A0A0B4J271 114 aa13.81□□□□□ -0.2
COMMD1-208ENST00000472729 SNURFLB1AK76 121 aa13.81□□□□□ -0.2
COMMD1-208ENST00000472729 F5H768 121 aa13.81□□□□□ -0.2
COMMD1-208ENST00000472729 NOP10Q9NPE3 64 aaKnown RBP13.81□□□□□ -0.2
COMMD1-208ENST00000472729 CBY3A6NI87 242 aa13.8□□□□□ -0.2
COMMD1-208ENST00000472729 NDUFB4O95168 129 aa13.8□□□□□ -0.2
COMMD1-208ENST00000472729 SLC25A5P05141 298 aaKnown RBP13.8□□□□□ -0.2
COMMD1-208ENST00000472729 ATP5G1P05496 136 aa13.8□□□□□ -0.2
COMMD1-208ENST00000472729 ATP5G3P48201 142 aa13.8□□□□□ -0.2
COMMD1-208ENST00000472729 ERCC8Q13216 396 aa13.8□□□□□ -0.2
COMMD1-208ENST00000472729 KHDC3LQ587J8 217 aa13.8□□□□□ -0.2
COMMD1-208ENST00000472729 TMEM88Q6PEY1 159 aa13.8□□□□□ -0.2
COMMD1-208ENST00000472729 EPPK1P58107 5090 aaKnown RBP13.79□□□□□ -0.2
COMMD1-208ENST00000472729 A0A1W2PPV4 95 aa13.79□□□□□ -0.2
COMMD1-208ENST00000472729 GPX1P07203 203 aa13.79□□□□□ -0.2
COMMD1-208ENST00000472729 UBE2L3P68036 154 aaKnown RBP13.79□□□□□ -0.2
COMMD1-208ENST00000472729 FCN2Q15485 313 aa13.79□□□□□ -0.2
COMMD1-208ENST00000472729 C15orf53Q8NAA6 179 aa13.79□□□□□ -0.2
COMMD1-208ENST00000472729 FAM167A-AS1Q96KT0 104 aa13.79□□□□□ -0.2
COMMD1-208ENST00000472729 PYGO2Q9BRQ0 406 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms