RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 FGF7P21781 194 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 TAS2R60P59551 318 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 IFITM3Q01628 133 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 KIR3DS1Q14943 382 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 FCN2Q15485 313 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 GUK1Q16774 197 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 ATP6V1FQ16864 119 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 UBE2DNLQ8IWF7 75 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 OR10J6PQ8NGY7 276 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 CHAC2Q8WUX2 184 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 C16orf74Q96GX8 76 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 PGPEP1Q9NXJ5 209 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 ZNF586Q9NXT0 402 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 PTTG2Q9NZH5 202 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 TRBV19A0A075B6N1 114 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 NPIPB6E9PJ23 425 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 H7BYZ3 331 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 M0R2N4 97 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 ZNF253O75346 499 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 NHLH2Q02577 135 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 LRRC37A5PQ49AS3 106 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 GCSAMLQ5JQS6 135 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 GFI1BQ5VTD9 330 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 OR5C1Q8NGR4 320 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 THAP6Q8TBB0 222 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 RNASE8Q8TDE3 154 aaKnown RBP6.36□□□□□ -1.39
USF1-204ENST00000472217 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
USF1-204ENST00000472217 C20orf144Q9BQM9 153 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 NPCDR1Q9BY65 106 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 NMES1Q9C002 83 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 OR5AC2Q9NZP5 309 aa6.36□□□□□ -1.39
USF1-204ENST00000472217 IGLV2-18A0A075B6J9 118 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 E5RGE8 158 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 F5H768 121 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 INMT-MINDY4F8WBC2 141 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 H0YIZ8 118 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 J3KRW8 73 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 M0R3E3 92 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 PRAF2O60831 178 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 MPDU1O75352 247 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 NDUFB4O95168 129 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 RLN2P04090 185 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 ATP5G1P05496 136 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 CT45A10P0DMU9 189 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 PYYP10082 97 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 ATP5G3P48201 142 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 RNF212Q495C1 297 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 ZNF493Q6ZR52 646 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 LINC00336Q6ZUF6 198 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 C15orf53Q8NAA6 179 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 MRPL53Q96EL3 112 aaKnown RBP6.35□□□□□ -1.39
USF1-204ENST00000472217 SLC25A31Q9H0C2 315 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 NOP10Q9NPE3 64 aaKnown RBP6.35□□□□□ -1.39
USF1-204ENST00000472217 TMEM14CQ9P0S9 112 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 TIMM8BQ9Y5J9 83 aaPredicted RBP6.35□□□□□ -1.39
USF1-204ENST00000472217 FRAS1Q86XX4 4008 aa6.35□□□□□ -1.39
USF1-204ENST00000472217 TRAV12-3A0A0B4J271 114 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 CBY3A6NI87 242 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 RTL8CO15255 209 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 HIST1H1EP10412 219 aaKnown RBP6.34□□□□□ -1.39
USF1-204ENST00000472217 LEPP41159 167 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
USF1-204ENST00000472217 H2BFSP57053 126 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 CYCSP99999 105 aaKnown RBP6.34□□□□□ -1.39
USF1-204ENST00000472217 CLINT1Q14677 625 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 LGALS9BQ3B8N2 356 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 Q6ZR54 194 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 ODF3Q96PU9 254 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 MARVELD1Q9BSK0 173 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 SLC25A2Q9BXI2 301 aa6.34□□□□□ -1.39
USF1-204ENST00000472217 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 ERCC8Q13216 396 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 PDE6HQ13956 83 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 MIR17HGQ75NE6 70 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 CCDC28AQ8IWP9 274 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 EXOC3-AS1Q8N2X6 119 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 BLNKQ8WV28 456 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 PPP1R1CQ8WVI7 109 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 FAM167A-AS1Q96KT0 104 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 WDR61Q9GZS3 305 aaKnown RBP6.33□□□□□ -1.4
USF1-204ENST00000472217 PRELID1Q9Y255 219 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 TIMM9Q9Y5J7 89 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
USF1-204ENST00000472217 NACAE9PAV3 2078 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 IGKV2-40A0A087WW87 121 aaPredicted RBP6.32□□□□□ -1.4
USF1-204ENST00000472217 PRSS29PA6NIE9 313 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 NUDT3O95989 172 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 IGKV2D-40P01614 121 aaPredicted RBP6.32□□□□□ -1.4
USF1-204ENST00000472217 SLC25A5P05141 298 aaKnown RBP6.32□□□□□ -1.4
USF1-204ENST00000472217 ICAM4Q14773 271 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 LINC00612Q8N6U2 182 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 FAM19A4Q96LR4 140 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 PYGO2Q9BRQ0 406 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 ATG101Q9BSB4 218 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 AGPAT4-IT1Q9H0P7 198 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 AAMDCQ9H7C9 122 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 KCNIP2Q9NS61 270 aa6.32□□□□□ -1.4
USF1-204ENST00000472217 GAGE12BA1L429 117 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 C7orf71A4D174 169 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 SNURFLB1AK76 121 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms