RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 H7BYZ3 331 aa15.84■□□□□ 0.13
C9orf3-213ENST00000471978 FAM3BP58499 235 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-213ENST00000471978 S100A10P60903 97 aa15.84■□□□□ 0.13
C9orf3-213ENST00000471978 KIR3DS1Q14943 382 aa15.84■□□□□ 0.13
C9orf3-213ENST00000471978 SOHLH1Q5JUK2 328 aa15.84■□□□□ 0.13
C9orf3-213ENST00000471978 OR1L4Q8NGR5 311 aa15.84■□□□□ 0.13
C9orf3-213ENST00000471978 SAT2Q96F10 170 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-213ENST00000471978 PARD6GQ9BYG4 376 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-213ENST00000471978 NUDT3O95989 172 aa15.83■□□□□ 0.12
C9orf3-213ENST00000471978 VWC2Q2TAL6 325 aa15.83■□□□□ 0.12
C9orf3-213ENST00000471978 RNASE8Q8TDE3 154 aaKnown RBP15.83■□□□□ 0.12
C9orf3-213ENST00000471978 TMEM263Q8WUH6 116 aaKnown RBP15.83■□□□□ 0.12
C9orf3-213ENST00000471978 PFDN5Q99471 154 aa15.83■□□□□ 0.12
C9orf3-213ENST00000471978 C20orf144Q9BQM9 153 aa15.83■□□□□ 0.12
C9orf3-213ENST00000471978 CCDC32Q9BV29 185 aa15.83■□□□□ 0.12
C9orf3-213ENST00000471978 NOP10Q9NPE3 64 aaKnown RBP15.83■□□□□ 0.12
C9orf3-213ENST00000471978 LYRM2Q9NU23 88 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-213ENST00000471978 UBE2L5PA0A1B0GUS4 154 aa15.82■□□□□ 0.12
C9orf3-213ENST00000471978 S100A11P31949 105 aa15.82■□□□□ 0.12
C9orf3-213ENST00000471978 SULT1A1P50225 295 aa15.82■□□□□ 0.12
C9orf3-213ENST00000471978 GUK1Q16774 197 aa15.82■□□□□ 0.12
C9orf3-213ENST00000471978 FAM240BA0A1B0GVZ2 78 aa15.81■□□□□ 0.12
C9orf3-213ENST00000471978 RPL29P47914 159 aaKnown RBP15.81■□□□□ 0.12
C9orf3-213ENST00000471978 BAXQ07812 192 aa15.81■□□□□ 0.12
C9orf3-213ENST00000471978 RAB32Q13637 225 aa15.81■□□□□ 0.12
C9orf3-213ENST00000471978 C1orf134Q5TEV5 83 aa15.81■□□□□ 0.12
C9orf3-213ENST00000471978 GFI1BQ5VTD9 330 aa15.81■□□□□ 0.12
C9orf3-213ENST00000471978 STX12Q86Y82 276 aa15.81■□□□□ 0.12
C9orf3-213ENST00000471978 SLC39A9Q9NUM3 307 aa15.81■□□□□ 0.12
C9orf3-213ENST00000471978 IGSF23A1L1A6 192 aa15.8■□□□□ 0.12
C9orf3-213ENST00000471978 IL15RAQ13261 267 aa15.8■□□□□ 0.12
C9orf3-213ENST00000471978 CCDC28AQ8IWP9 274 aa15.8■□□□□ 0.12
C9orf3-213ENST00000471978 TMEM252Q8N6L7 170 aa15.8■□□□□ 0.12
C9orf3-213ENST00000471978 J3KRW8 73 aa15.79■□□□□ 0.12
C9orf3-213ENST00000471978 CT45A10P0DMU9 189 aa15.79■□□□□ 0.12
C9orf3-213ENST00000471978 HBG1P69891 147 aa15.79■□□□□ 0.12
C9orf3-213ENST00000471978 HBG2P69892 147 aa15.79■□□□□ 0.12
C9orf3-213ENST00000471978 ZNF586Q9NXT0 402 aa15.79■□□□□ 0.12
C9orf3-213ENST00000471978 MED14OSP0DP75 135 aa15.78■□□□□ 0.12
C9orf3-213ENST00000471978 FGF7P21781 194 aa15.78■□□□□ 0.12
C9orf3-213ENST00000471978 LEPP41159 167 aa15.78■□□□□ 0.12
C9orf3-213ENST00000471978 MZT2BQ6NZ67 158 aa15.78■□□□□ 0.12
C9orf3-213ENST00000471978 RNF141Q8WVD5 230 aa15.78■□□□□ 0.12
C9orf3-213ENST00000471978 PCLOQ9Y6V0 5065 aa15.78■□□□□ 0.12
C9orf3-213ENST00000471978 NPIPB6E9PJ23 425 aa15.77■□□□□ 0.12
C9orf3-213ENST00000471978 ZNF253O75346 499 aa15.77■□□□□ 0.12
C9orf3-213ENST00000471978 CCL18P55774 89 aa15.77■□□□□ 0.12
C9orf3-213ENST00000471978 ATP6V1FQ16864 119 aa15.77■□□□□ 0.12
C9orf3-213ENST00000471978 CHAC2Q8WUX2 184 aa15.77■□□□□ 0.12
C9orf3-213ENST00000471978 ODF3Q96PU9 254 aa15.77■□□□□ 0.12
C9orf3-213ENST00000471978 TRAV12-3A0A0B4J271 114 aa15.76■□□□□ 0.11
C9orf3-213ENST00000471978 ZNRF2Q8NHG8 242 aa15.76■□□□□ 0.11
C9orf3-213ENST00000471978 GPN1Q9HCN4 374 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-213ENST00000471978 TRBV19A0A075B6N1 114 aa15.75■□□□□ 0.11
C9orf3-213ENST00000471978 OR5I1Q13606 314 aa15.75■□□□□ 0.11
C9orf3-213ENST00000471978 LINC00612Q8N6U2 182 aa15.75■□□□□ 0.11
C9orf3-213ENST00000471978 TMEM14CQ9P0S9 112 aa15.75■□□□□ 0.11
C9orf3-213ENST00000471978 NBDYA0A0U1RRE5 68 aa15.74■□□□□ 0.11
C9orf3-213ENST00000471978 SNURFLB1AK76 121 aa15.74■□□□□ 0.11
C9orf3-213ENST00000471978 M0R3E3 92 aa15.74■□□□□ 0.11
C9orf3-213ENST00000471978 RLN2P04090 185 aa15.74■□□□□ 0.11
C9orf3-213ENST00000471978 CLINT1Q14677 625 aa15.74■□□□□ 0.11
C9orf3-213ENST00000471978 MRPL53Q96EL3 112 aaKnown RBP15.74■□□□□ 0.11
C9orf3-213ENST00000471978 LINC00588Q9Y4M8 146 aa15.74■□□□□ 0.11
C9orf3-213ENST00000471978 GAGE12BA1L429 117 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 MPDU1O75352 247 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 GAGE7O76087 117 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 GAGE12FP0CL80 117 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 GAGE12GP0CL81 117 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 GAGE12IP0CL82 117 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 HIST1H1EP10412 219 aaKnown RBP15.73■□□□□ 0.11
C9orf3-213ENST00000471978 ASAH1Q13510 395 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 LINC00299Q6ZSB3 139 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 GNPNAT1Q96EK6 184 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-213ENST00000471978 PYGO2Q9BRQ0 406 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 NPCDR1Q9BY65 106 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 TIMM9Q9Y5J7 89 aa15.73■□□□□ 0.11
C9orf3-213ENST00000471978 TRAV26-1A0A087WT03 109 aa15.72■□□□□ 0.11
C9orf3-213ENST00000471978 NDUFB4O95168 129 aa15.72■□□□□ 0.11
C9orf3-213ENST00000471978 PYYP10082 97 aa15.72■□□□□ 0.11
C9orf3-213ENST00000471978 ERCC8Q13216 396 aa15.72■□□□□ 0.11
C9orf3-213ENST00000471978 GCSAMLQ5JQS6 135 aa15.72■□□□□ 0.11
C9orf3-213ENST00000471978 S100ZQ8WXG8 99 aa15.72■□□□□ 0.11
C9orf3-213ENST00000471978 PRELID1Q9Y255 219 aa15.72■□□□□ 0.11
C9orf3-213ENST00000471978 SLC25A5P05141 298 aaKnown RBP15.71■□□□□ 0.11
C9orf3-213ENST00000471978 M6PRP20645 277 aa15.71■□□□□ 0.11
C9orf3-213ENST00000471978 NHLH2Q02577 135 aa15.71■□□□□ 0.11
C9orf3-213ENST00000471978 PDE6HQ13956 83 aa15.71■□□□□ 0.11
C9orf3-213ENST00000471978 SSX7Q7RTT5 188 aa15.71■□□□□ 0.11
C9orf3-213ENST00000471978 BLNKQ8WV28 456 aa15.71■□□□□ 0.11
C9orf3-213ENST00000471978 SIX6O95475 246 aa15.7■□□□□ 0.1
C9orf3-213ENST00000471978 HOXA5P20719 270 aa15.7■□□□□ 0.1
C9orf3-213ENST00000471978 OR5C1Q8NGR4 320 aa15.7■□□□□ 0.1
C9orf3-213ENST00000471978 THAP6Q8TBB0 222 aa15.7■□□□□ 0.1
C9orf3-213ENST00000471978 ENKURQ8TC29 256 aa15.7■□□□□ 0.1
C9orf3-213ENST00000471978 LINC00477Q96M19 166 aa15.7■□□□□ 0.1
C9orf3-213ENST00000471978 A0A0J9YY99 117 aa15.69■□□□□ 0.1
C9orf3-213ENST00000471978 C7orf71A4D174 169 aa15.69■□□□□ 0.1
C9orf3-213ENST00000471978 ZNF575Q86XF7 245 aa15.69■□□□□ 0.1
C9orf3-213ENST00000471978 EXOC3-AS1Q8N2X6 119 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms