RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PLA2G10O15496 165 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 RPL23P62829 140 aaKnown RBP6.87□□□□□ -1.31
CD47-204ENST00000471694 Q6P435 159 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 NYNRINQ9P2P1 1898 aaKnown RBP6.87□□□□□ -1.31
CD47-204ENST00000471694 TMEM238C9JI98 176 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 H3BUA1 57 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 IGFBP3P17936 291 aaPredicted RBP6.87□□□□□ -1.31
CD47-204ENST00000471694 PI4KAP42356 2102 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 ZFAND6Q6FIF0 208 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 A0A1W2PRE2 83 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 SPRY2O43597 315 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 CXCL2P19875 107 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 IGKV1-27A0A075B6S5 117 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 K7ERU9 68 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 LOXP28300 417 aaPredicted RBP6.86□□□□□ -1.31
CD47-204ENST00000471694 WIPF2Q8TF74 440 aaPredicted RBP6.86□□□□□ -1.31
CD47-204ENST00000471694 CEP290O15078 2479 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 SIP14410 1827 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 GYPEP15421 78 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 Q6ZWC4 215 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 NDUFA11Q86Y39 141 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 C16orf74Q96GX8 76 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 WDR81Q562E7 1941 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 SIPA1L1O43166 1804 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 LRRC75A-AS1Q8N1F1 130 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 GTSF1Q8WW33 167 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 RSPO3Q9BXY4 272 aaPredicted RBP6.86□□□□□ -1.31
CD47-204ENST00000471694 IGKV1-16P04430 117 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 TIMM21Q9BVV7 248 aa6.86□□□□□ -1.31
CD47-204ENST00000471694 XCL1P47992 114 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 CCL20P78556 96 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 C9orf62Q8N4C0 152 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 STAG3L3P0CL85 134 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 FOXI2Q6ZQN5 318 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 IGLV3-9A0A075B6K5 115 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 LYPD3O95274 346 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 IGHV2-70P01814 119 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 LINC00205P59089 165 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 GAGE2BQ13066 116 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 U3KQE9 123 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 I3L3M4 83 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 LY6G5BQ8NDX9 201 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 WFDC11Q8NEX6 87 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 ARMS2P0C7Q2 107 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 UQCR10Q9UDW1 63 aa6.85□□□□□ -1.31
CD47-204ENST00000471694 A0A1W2PPI3 338 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 MMP23AO75900 390 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 SH2D6Q7Z4S9 175 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 CENPVL3A0A0U1RRI6 287 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 CACNA1IQ9P0X4 2223 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 SPTA1P02549 2419 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 LINC00473A8K010 186 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 SPATA25Q9BR10 227 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 D6R8Y8 96 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 TBX6O95947 436 aaPredicted RBP6.84□□□□□ -1.31
CD47-204ENST00000471694 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 TREML4Q6UXN2 200 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 NDUFAF3Q9BU61 184 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 A0A0A6YYD4 124 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 HIST1H4AP62805 103 aaKnown RBP6.84□□□□□ -1.31
CD47-204ENST00000471694 ORAOV1Q8WV07 137 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 MGST2Q99735 147 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 SHANK2-AS3Q9BTD1 123 aa6.84□□□□□ -1.31
CD47-204ENST00000471694 TEX36Q5VZQ5 186 aa6.84□□□□□ -1.32
CD47-204ENST00000471694 C4orf3Q8WVX3 66 aa6.84□□□□□ -1.32
CD47-204ENST00000471694 TMEM242Q9NWH2 141 aa6.84□□□□□ -1.32
CD47-204ENST00000471694 DIDO1Q9BTC0 2240 aaKnown RBP6.83□□□□□ -1.32
CD47-204ENST00000471694 LYPD1Q8N2G4 141 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 FAM19A2Q8N3H0 131 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 INSL3P51460 131 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 ZNF833PQ6ZTB9 187 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 ATP6V0BQ99437 205 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 SCRT2Q9NQ03 307 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 TANC1Q9C0D5 1861 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 ETDCA0A1B0GVM5 59 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 TMEM190Q8WZ59 177 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 CAMK2N2Q96S95 79 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 OVOL2Q9BRP0 275 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 ZNF134P52741 427 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 BCL6BQ8N143 479 aaPredicted RBP6.83□□□□□ -1.32
CD47-204ENST00000471694 IGFBPL1Q8WX77 278 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 ZC2HC1AQ96GY0 325 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 ERG28Q9UKR5 140 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 CACNA1EQ15878 2313 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 PGPEP1LA6NFU8 196 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 IGLL1P15814 213 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 DNAJC30Q96LL9 226 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 GSN-AS1Q9NRJ2 163 aa6.83□□□□□ -1.32
CD47-204ENST00000471694 PLXNA4Q9HCM2 1894 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 IGHV4OR15-8A0A075B7B6 117 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 A0A087WW49 117 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 C9orf153Q5TBE3 101 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 DOCK8Q8NF50 2099 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 NLRC5Q86WI3 1866 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 C5orf63A6NC05 138 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 DOCK7Q96N67 2140 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 A0A1B0GWB2 263 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms