RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 C9orf170A2RU37 121 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 JMJD7-PLA2G4BH0Y9G9 81 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 H3BQV1 296 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 PPYP01298 95 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 IGLV3-1P01715 115 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 G0S2P27469 103 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 GNG10P50151 68 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 CIRBPQ14011 172 aaKnown RBP0.46□□□□□ -2.34
COPS3-206ENST00000471414 TRIQKQ629K1 86 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 LINC00575Q6W349 94 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 PRR15Q8IV56 129 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 BORCS8Q96FH0 119 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 CARD19Q96LW7 228 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 WFDC10AQ9H1F0 79 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 MED11Q9P086 117 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 HSPB8Q9UJY1 196 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 FANCMQ8IYD8 2048 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 AHNAK2Q8IVF2 5795 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 ERBINQ96RT1 1412 aa0.46□□□□□ -2.34
COPS3-206ENST00000471414 NUP210Q8TEM1 1887 aaPredicted RBP0.46□□□□□ -2.34
COPS3-206ENST00000471414 AHNAKQ09666 5890 aaKnown RBP0.45□□□□□ -2.34
COPS3-206ENST00000471414 ZFC3H1O60293 1989 aaKnown RBP0.45□□□□□ -2.34
COPS3-206ENST00000471414 PRB4P10163 310 aaPredicted RBP0.45□□□□□ -2.34
COPS3-206ENST00000471414 SPATA45Q537H7 98 aa0.45□□□□□ -2.34
COPS3-206ENST00000471414 DCUN1D2Q6PH85 259 aa0.45□□□□□ -2.34
COPS3-206ENST00000471414 DYDC1Q8WWB3 177 aa0.45□□□□□ -2.34
COPS3-206ENST00000471414 TCEAL2Q9H3H9 227 aaPredicted RBP0.45□□□□□ -2.34
COPS3-206ENST00000471414 OTORQ9NRC9 128 aa0.45□□□□□ -2.34
COPS3-206ENST00000471414 NUBP2Q9Y5Y2 271 aa0.45□□□□□ -2.34
COPS3-206ENST00000471414 TECPR2O15040 1411 aa0.45□□□□□ -2.34
COPS3-206ENST00000471414 KIAA1107Q9UPP5 1409 aa0.45□□□□□ -2.34
COPS3-206ENST00000471414 TRAPPC8Q9Y2L5 1435 aa0.45□□□□□ -2.34
COPS3-206ENST00000471414 A0A096LPI6 279 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 TRDV1A0A1B0GX56 115 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 MAP1LC3B2A6NCE7 125 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 KPNA4O00629 521 aaPredicted RBP0.44□□□□□ -2.34
COPS3-206ENST00000471414 IGHV3-33P01772 117 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 MT-ND6P03923 174 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 MIR22HGQ0VDD5 57 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 TMEM78Q5T7P6 136 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 GLIPR1L1Q6UWM5 242 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 FOXI2Q6ZQN5 318 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 OR10AC1Q8NH08 325 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 ISOC1Q96CN7 298 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 MCEEQ96PE7 176 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 PCBD2Q9H0N5 130 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 CST11Q9H112 138 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 LRTM1Q9HBL6 345 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 NAT8BQ9UHF3 227 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 TPRKBQ9Y3C4 175 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 TET1Q8NFU7 2136 aa0.44□□□□□ -2.34
COPS3-206ENST00000471414 TRAV23DV6A0A075B6W5 121 aa0.43□□□□□ -2.34
COPS3-206ENST00000471414 S100A5P33763 92 aa0.43□□□□□ -2.34
COPS3-206ENST00000471414 MRPS36P82909 103 aaKnown RBP0.43□□□□□ -2.34
COPS3-206ENST00000471414 DIAPH2-AS1Q14236 149 aa0.43□□□□□ -2.34
COPS3-206ENST00000471414 LINC00269Q8N2A0 174 aa0.43□□□□□ -2.34
COPS3-206ENST00000471414 OR4B1Q8NGF8 309 aa0.43□□□□□ -2.34
COPS3-206ENST00000471414 EFCAB11Q9BUY7 163 aa0.43□□□□□ -2.34
COPS3-206ENST00000471414 TAF9BQ9HBM6 251 aa0.43□□□□□ -2.34
COPS3-206ENST00000471414 GABARAPH6UMI1 98 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 H7BYZ3 331 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 PFDN1O60925 122 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 CD14P08571 375 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 BCL2P10415 239 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 FABP2P12104 132 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 FABP4P15090 132 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 VMA21Q3ZAQ7 101 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 LINC00299Q6ZSB3 139 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 ZCCHC23Q6ZST2 131 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 STX12Q86Y82 276 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 CCL4L1Q8NHW4 92 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 DIRC1Q969H9 104 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 OR4C12Q96R67 309 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 CCDC32Q9BV29 185 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 ATPIF1Q9UII2 106 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 LAMTOR2Q9Y2Q5 125 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 KIAA1549LQ6ZVL6 1849 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 USP54Q70EL1 1684 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 PBRM1Q86U86 1689 aa0.42□□□□□ -2.34
COPS3-206ENST00000471414 ASCC3Q8N3C0 2202 aaKnown RBP0.42□□□□□ -2.34
COPS3-206ENST00000471414 ZGRF1Q86YA3 2104 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 BCL9O00512 1426 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 MED12Q93074 2177 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 A0A1W2PRE2 83 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 FABP1P07148 127 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 NEFHP12036 1026 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 S100A11P31949 105 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 SDC2P34741 201 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 OCIAD2Q56VL3 154 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 ANGPTL5Q86XS5 388 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 OR5H6Q8NGV6 325 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 V9GYQ6 96 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 GPR98Q8WXG9 6306 aa0.41□□□□□ -2.34
COPS3-206ENST00000471414 TCOF1Q13428 1488 aaKnown RBP0.41□□□□□ -2.34
COPS3-206ENST00000471414 TANC2Q9HCD6 1990 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 A0A0J9YY99 117 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 C5orf58C9J3I9 102 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 E7EQ34 232 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 K7EIL1 84 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms