RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ZNF429Q86V71 674 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TTC9CQ8N5M4 171 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TEX29Q8N6K0 151 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM252Q8N6L7 170 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TCTEX1D1Q8N7M0 179 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 OR4X2Q8NGF9 303 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 OR8H1Q8NGG4 311 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 OR5B3Q8NH48 314 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 VSTM2AQ8TAG5 236 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF502Q8TBZ5 544 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 MYOZ3Q8TDC0 251 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 C16orf74Q96GX8 76 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 SPIN2AQ99865 258 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 SPIN2BQ9BPZ2 258 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 NMES1Q9C002 83 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 DOK5Q9P104 306 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF257Q9Y2Q1 563 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 SORL1Q92673 2214 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TRAV5A0A0B4J249 113 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 TEX46H3BTG2 121 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 H3BTX0 84 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 L7N2F9 121 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 M0QZK8 103 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 HMGB3O15347 200 aaKnown RBP2.71□□□□□ -1.98
COL9A1-206ENST00000470652 B3GALNT1O75752 331 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 IGKV1-17P01599 117 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 PRB2P02812 416 aaPredicted RBP2.71□□□□□ -1.98
COL9A1-206ENST00000470652 OR8U8P0C7N1 319 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 SLC25A6P12236 298 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 OR10J1P30954 320 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 MAS1LP35410 378 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 SNCAP37840 140 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 CNN1P51911 297 aaKnown RBP2.71□□□□□ -1.98
COL9A1-206ENST00000470652 SYNJ2BPP57105 145 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 DEFB1P60022 68 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 SSTP61278 116 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 RPL23AP62750 156 aaKnown RBP2.71□□□□□ -1.98
COL9A1-206ENST00000470652 ERHP84090 104 aaKnown RBP2.71□□□□□ -1.98
COL9A1-206ENST00000470652 ATP5G2Q06055 141 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 GAMTQ14353 236 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 AKIRIN2Q53H80 203 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 Q56UQ5 140 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 SPATA31B1PQ5VZV4 182 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 MIC13Q5XKP0 118 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 RPL7L1Q6DKI1 246 aaKnown RBP2.71□□□□□ -1.98
COL9A1-206ENST00000470652 PVRIGQ6DKI7 326 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 SSX7Q7RTT5 188 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 C9orf62Q8N4C0 152 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 OR4F17Q8NGA8 305 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 OR5C1Q8NGR4 320 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 OR1P1Q8NH06 330 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 OR52E5Q8NH55 327 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 SMIM8Q96KF7 97 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 OR4F4Q96R69 305 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 MGST2Q99735 147 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 CITED1Q99966 193 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 RSG1Q9BU20 258 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 VSIRQ9H7M9 311 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 ENY2Q9NPA8 101 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 CYTL1Q9NRR1 136 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 LYRM2Q9NU23 88 aaPredicted RBP2.71□□□□□ -1.98
COL9A1-206ENST00000470652 TNFSF18Q9UNG2 199 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 STRAPQ9Y3F4 350 aaKnown RBP2.71□□□□□ -1.98
COL9A1-206ENST00000470652 HSPB11Q9Y547 144 aa2.71□□□□□ -1.98
COL9A1-206ENST00000470652 IGKV3-7A0A075B6H7 116 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.7□□□□□ -1.98
COL9A1-206ENST00000470652 A0A1B0GV50 99 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 IZUMO1RA6ND01 250 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 I3L521 148 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 ATG12O94817 140 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 YIF1AO95070 293 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 CFDP00746 253 aaPredicted RBP2.7□□□□□ -1.98
COL9A1-206ENST00000470652 CTSGP08311 255 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 LGALS1P09382 135 aaKnown RBP2.7□□□□□ -1.98
COL9A1-206ENST00000470652 IGLC1P0CG04 106 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 SLC25A4P12235 298 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 FGF7P21781 194 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 RPL12P30050 165 aaKnown RBP2.7□□□□□ -1.98
COL9A1-206ENST00000470652 HTR2BP41595 481 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 AKR1C1Q04828 323 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 USF2Q15853 346 aaPredicted RBP2.7□□□□□ -1.98
COL9A1-206ENST00000470652 PRR4Q16378 134 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 FAM74A1Q5RGS3 127 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 PATE2Q6UY27 113 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 C12orf54Q6X4T0 127 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 IL34Q6ZMJ4 242 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 ZNF546Q86UE3 836 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 TCTE3Q8IZS6 198 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 HSD17B11Q8NBQ5 300 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 NECAP1Q8NC96 275 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 BPIFCQ8NFQ6 507 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 OR11H1Q8NG94 326 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 OR51G1Q8NGK1 321 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 OR1N2Q8NGR9 330 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 C20orf24Q9BUV8 137 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 SCRT1Q9BWW7 348 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 GGTLC1Q9BX51 225 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 FKBP11Q9NYL4 201 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 C21orf62Q9NYP8 219 aa2.7□□□□□ -1.98
COL9A1-206ENST00000470652 TMEM213A2RRL7 107 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms