RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SOX21Q9Y651 276 aaPredicted RBP1.35□□□□□ -2.19
BRCA2-202ENST00000470094 MAGI1Q96QZ7 1491 aaPredicted RBP1.35□□□□□ -2.19
BRCA2-202ENST00000470094 ABCA10Q8WWZ4 1543 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 MDC1Q14676 2089 aaKnown RBP1.35□□□□□ -2.19
BRCA2-202ENST00000470094 RGS12O14924 1447 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 NAIPQ13075 1403 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 TRGV2A0A075B6R0 118 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 TRBV6-5A0A0K0K1A5 114 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 LOC107984640A0A0U1RRK4 108 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 FAM92AA1XBS5 289 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 OR1I1O60431 355 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 IFNA17P01571 189 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 ASAH2BP0C7U1 165 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 MPC1LP0DKB6 136 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 SDC2P34741 201 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 ROMO1P60602 79 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 PKIAP61925 76 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 MSMO1Q15800 293 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 Q5XG85 94 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 OR5D16Q8NGK9 328 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 NAT14Q8WUY8 206 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 SFT2D1Q8WV19 159 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 LXNQ9BS40 222 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 CACYBPQ9HB71 228 aaKnown RBP1.34□□□□□ -2.19
BRCA2-202ENST00000470094 METTL1Q9UBP6 276 aaKnown RBP1.34□□□□□ -2.19
BRCA2-202ENST00000470094 TRAPPC2LQ9UL33 140 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 BCL9LQ86UU0 1499 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 ARHGAP35Q9NRY4 1499 aa1.34□□□□□ -2.19
BRCA2-202ENST00000470094 NUMA1Q14980 2115 aa1.34□□□□□ -2.2
BRCA2-202ENST00000470094 SCN8AQ9UQD0 1980 aa1.34□□□□□ -2.2
BRCA2-202ENST00000470094 FBN3Q75N90 2809 aa1.34□□□□□ -2.2
BRCA2-202ENST00000470094 MYOM3Q5VTT5 1437 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 FGD6Q6ZV73 1430 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 MYH7P12883 1935 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 FANCAO15360 1455 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 MBD5Q9P267 1494 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 RAPGEF2Q9Y4G8 1499 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 TMEM189A5PLL7 270 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 K7ERJ3 54 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 LYZL6O75951 148 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 SNAPC5O75971 98 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 UBL3O95164 117 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 IGF2P01344 180 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 TRAPPC2P0DI81 140 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 TRAPPC2BP0DI82 140 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 MGST1P10620 155 aaKnown RBP1.33□□□□□ -2.2
BRCA2-202ENST00000470094 NDUFA6P56556 154 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 DCDP81605 110 aaKnown RBP1.33□□□□□ -2.2
BRCA2-202ENST00000470094 MRPS10P82664 201 aaKnown RBP1.33□□□□□ -2.2
BRCA2-202ENST00000470094 VMA21Q3ZAQ7 101 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 CTAGE3PQ8IX95 158 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 OR8I2Q8N0Y5 310 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 LINC00301Q8NCQ3 95 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 OR5H6Q8NGV6 325 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 DIRC1Q969H9 104 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 PDCD10Q9BUL8 212 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 NIT2Q9NQR4 276 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 CALML5Q9NZT1 146 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 SCP2D1Q9UJQ7 156 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 ZFP30Q9Y2G7 519 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 CITO14578 2027 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 BICRAQ9NZM4 1560 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 WDR97A6NE52 1622 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 TMEM2Q9UHN6 1383 aa1.33□□□□□ -2.2
BRCA2-202ENST00000470094 OVOS2A0A0J9YW53 1432 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 TROQ12816 1431 aaPredicted RBP1.32□□□□□ -2.2
BRCA2-202ENST00000470094 OVOS2Q6IE36 1432 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 LAMB2P55268 1798 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 CASZ1Q86V15 1759 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 A0A087WSZ3 146 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 TRAV12-1A0A0B4J245 112 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 TRAV1-1A0A0B4J248 108 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 TRBV27A0A0K0K1C4 114 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 C5orf58C9J3I9 102 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 C17orf112F2Z3M2 114 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 K7ERU9 68 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 CORTO00230 105 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 RER1O15258 196 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 DPM2O94777 84 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 PROSCO94903 275 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 IGLV1-51P01701 117 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 FABP2P12104 132 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 ZNF25P17030 456 aaPredicted RBP1.32□□□□□ -2.2
BRCA2-202ENST00000470094 RPL22P35268 128 aaKnown RBP1.32□□□□□ -2.2
BRCA2-202ENST00000470094 ZNF93P35789 620 aaPredicted RBP1.32□□□□□ -2.2
BRCA2-202ENST00000470094 SSR2P43308 183 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 RRAS2P62070 204 aaPredicted RBP1.32□□□□□ -2.2
BRCA2-202ENST00000470094 PPP3R1P63098 170 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 KLRD1Q13241 179 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 PDE6HQ13956 83 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 KRTAP21-3Q3LHN1 58 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 C6orf52Q5T4I8 152 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 LINC00305Q7Z4B0 112 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 RPS19BP1Q86WX3 136 aaKnown RBP1.32□□□□□ -2.2
BRCA2-202ENST00000470094 C9orf62Q8N4C0 152 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 CCL4L1Q8NHW4 92 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 RETNLBQ9BQ08 111 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 TAF9BQ9HBM6 251 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 CBLN4Q9NTU7 201 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 LY96Q9Y6Y9 160 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms