RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 TIMM8BQ9Y5J9 83 aaPredicted RBP11.77□□□□□ -0.53
C4A-250ENST00000469975 UBE2L5PA0A1B0GUS4 154 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 CT45A10P0DMU9 189 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 S100A10P60903 97 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 CNPY1Q3B7I2 92 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 SOHLH1Q5JUK2 328 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 C12orf45Q8N5I9 185 aaPredicted RBP11.76□□□□□ -0.53
C4A-250ENST00000469975 OR10J6PQ8NGY7 276 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 ZNRF2Q8NHG8 242 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 DNAJC4Q9NNZ3 241 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 RNF24Q9Y225 148 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 WDR83OSQ9Y284 106 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 LINC00588Q9Y4M8 146 aa11.76□□□□□ -0.53
C4A-250ENST00000469975 H7BYZ3 331 aa11.75□□□□□ -0.53
C4A-250ENST00000469975 TNP2Q05952 138 aa11.75□□□□□ -0.53
C4A-250ENST00000469975 TMEM263Q8WUH6 116 aaKnown RBP11.75□□□□□ -0.53
C4A-250ENST00000469975 C2orf50Q96LR7 162 aa11.75□□□□□ -0.53
C4A-250ENST00000469975 UQCC1Q9NVA1 299 aa11.75□□□□□ -0.53
C4A-250ENST00000469975 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
C4A-250ENST00000469975 TRAV12-3A0A0B4J271 114 aa11.74□□□□□ -0.53
C4A-250ENST00000469975 NBDYA0A0U1RRE5 68 aa11.74□□□□□ -0.53
C4A-250ENST00000469975 RAB32Q13637 225 aa11.74□□□□□ -0.53
C4A-250ENST00000469975 ZNF493Q6ZR52 646 aa11.74□□□□□ -0.53
C4A-250ENST00000469975 Q6ZRG5 221 aa11.74□□□□□ -0.53
C4A-250ENST00000469975 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
C4A-250ENST00000469975 A0A0J9YY99 117 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 GAGE12BA1L429 117 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 GAGE7O76087 117 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 H2AFB2P0C5Z0 115 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 GAGE12FP0CL80 117 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 GAGE12GP0CL81 117 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 GAGE12IP0CL82 117 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 HOXA5P20719 270 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 FAM3BP58499 235 aaPredicted RBP11.73□□□□□ -0.53
C4A-250ENST00000469975 BAXQ07812 192 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 ERCC8Q13216 396 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 OR5I1Q13606 314 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 RAB31Q13636 194 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 VWC2Q2TAL6 325 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 OR1L4Q8NGR5 311 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 SLC39A9Q9NUM3 307 aa11.73□□□□□ -0.53
C4A-250ENST00000469975 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 NPIPB6E9PJ23 425 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 M0R3E3 92 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 SULT1A1P50225 295 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 IL15RAQ13261 267 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 C20orf144Q9BQM9 153 aa11.72□□□□□ -0.53
C4A-250ENST00000469975 LYRM2Q9NU23 88 aaPredicted RBP11.72□□□□□ -0.53
C4A-250ENST00000469975 PYYP10082 97 aa11.71□□□□□ -0.53
C4A-250ENST00000469975 FGF7P21781 194 aa11.71□□□□□ -0.53
C4A-250ENST00000469975 LEPP41159 167 aa11.71□□□□□ -0.53
C4A-250ENST00000469975 CCL18P55774 89 aa11.71□□□□□ -0.53
C4A-250ENST00000469975 CLINT1Q14677 625 aa11.71□□□□□ -0.53
C4A-250ENST00000469975 SSX7Q7RTT5 188 aa11.71□□□□□ -0.53
C4A-250ENST00000469975 CCDC28AQ8IWP9 274 aa11.71□□□□□ -0.53
C4A-250ENST00000469975 NDUFB4O95168 129 aa11.7□□□□□ -0.54
C4A-250ENST00000469975 PVALBP20472 110 aaPredicted RBP11.7□□□□□ -0.54
C4A-250ENST00000469975 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
C4A-250ENST00000469975 GUK1Q16774 197 aa11.7□□□□□ -0.54
C4A-250ENST00000469975 C6orf223Q8N319 242 aa11.7□□□□□ -0.54
C4A-250ENST00000469975 GNPNAT1Q96EK6 184 aaPredicted RBP11.7□□□□□ -0.54
C4A-250ENST00000469975 PFDN5Q99471 154 aa11.7□□□□□ -0.54
C4A-250ENST00000469975 GPN1Q9HCN4 374 aaPredicted RBP11.7□□□□□ -0.54
C4A-250ENST00000469975 LRP1BQ9NZR2 4599 aa11.7□□□□□ -0.54
C4A-250ENST00000469975 HSPG2P98160 4391 aa11.7□□□□□ -0.54
C4A-250ENST00000469975 TRBV19A0A075B6N1 114 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 FAM240BA0A1B0GVZ2 78 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 SIX6O95475 246 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 RLN2P04090 185 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 S100A11P31949 105 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 Q6ZTI0 123 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 STX12Q86Y82 276 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 EXOC3-AS1Q8N2X6 119 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 KRTAP4-5Q9BYR2 181 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 KRTAP1-5Q9BYS1 174 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 TMPRSS5Q9H3S3 457 aa11.69□□□□□ -0.54
C4A-250ENST00000469975 CD300CQ08708 224 aa11.68□□□□□ -0.54
C4A-250ENST00000469975 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
C4A-250ENST00000469975 THAP6Q8TBB0 222 aa11.68□□□□□ -0.54
C4A-250ENST00000469975 ODF3Q96PU9 254 aa11.68□□□□□ -0.54
C4A-250ENST00000469975 CCDC32Q9BV29 185 aa11.68□□□□□ -0.54
C4A-250ENST00000469975 M6PRP20645 277 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 HBG1P69891 147 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 HBG2P69892 147 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 NHLH2Q02577 135 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 Q6ZQT7 251 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 RXFP4Q8TDU9 374 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 SLC25A2Q9BXI2 301 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 NPCDR1Q9BY65 106 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 AGPAT4-IT1Q9H0P7 198 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 GSN-AS1Q9NRJ2 163 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 TMEM14CQ9P0S9 112 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 TIMM9Q9Y5J7 89 aa11.67□□□□□ -0.54
C4A-250ENST00000469975 IGKV2-40A0A087WW87 121 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms