RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 RHPN1-AS1Q9BWJ2 59 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 V9GYV3 84 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 IGKV2-40A0A087WW87 121 aaPredicted RBP13.82□□□□□ -0.2
SMC4-211ENST00000469858 ZNF705FA8MVS1 300 aaPredicted RBP13.82□□□□□ -0.2
SMC4-211ENST00000469858 CHEK1O14757 476 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 IGKV2D-40P01614 121 aaPredicted RBP13.82□□□□□ -0.2
SMC4-211ENST00000469858 TCTEX1D4Q5JR98 221 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 C1QL4Q86Z23 238 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 K7EMT4 169 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 MEOX2P50222 304 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 IMMP2LQ96T52 175 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 ASCL2Q99929 193 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 PSG8Q9UQ74 426 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 UFC1Q9Y3C8 167 aa13.82□□□□□ -0.2
SMC4-211ENST00000469858 DEFB136Q30KP8 78 aa13.81□□□□□ -0.2
SMC4-211ENST00000469858 LCN12Q6JVE5 192 aa13.81□□□□□ -0.2
SMC4-211ENST00000469858 TMEM183AQ8IXX5 376 aa13.81□□□□□ -0.2
SMC4-211ENST00000469858 ZFP82Q8N141 532 aa13.81□□□□□ -0.2
SMC4-211ENST00000469858 IL36BQ9NZH7 164 aa13.81□□□□□ -0.2
SMC4-211ENST00000469858 SMPXQ9UHP9 88 aa13.81□□□□□ -0.2
SMC4-211ENST00000469858 SELENOKQ9Y6D0 94 aa13.81□□□□□ -0.2
SMC4-211ENST00000469858 TRBV6-1A0A0K0K1D8 114 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 SERTM2A0A1B0GWG4 89 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 HOXD3P31249 432 aaPredicted RBP13.8□□□□□ -0.2
SMC4-211ENST00000469858 SYNJ2BPP57105 145 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 RPL11P62913 178 aaKnown RBP13.8□□□□□ -0.2
SMC4-211ENST00000469858 HIST2H2BDQ6DRA6 164 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 TRAV8-2A0A0B4J237 113 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 ZNF705GA8MUZ8 300 aaPredicted RBP13.8□□□□□ -0.2
SMC4-211ENST00000469858 C1orf196B1AJZ1 125 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 INAFM1C9JVW0 142 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 CDX1P47902 265 aaPredicted RBP13.8□□□□□ -0.2
SMC4-211ENST00000469858 ARL6IP6Q8N6S5 226 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 C16orf92Q96LL3 132 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 PYGO2Q9BRQ0 406 aa13.8□□□□□ -0.2
SMC4-211ENST00000469858 TMEM213A2RRL7 107 aa13.79□□□□□ -0.2
SMC4-211ENST00000469858 FOXL1Q12952 345 aa13.79□□□□□ -0.2
SMC4-211ENST00000469858 FAM231DQ6ZW35 169 aa13.79□□□□□ -0.2
SMC4-211ENST00000469858 NUDT10Q8NFP7 164 aa13.79□□□□□ -0.2
SMC4-211ENST00000469858 NUDT11Q96G61 164 aa13.79□□□□□ -0.2
SMC4-211ENST00000469858 IGKV3-7A0A075B6H7 116 aa13.78□□□□□ -0.2
SMC4-211ENST00000469858 LINC00322Q6ZN03 302 aaPredicted RBP13.78□□□□□ -0.2
SMC4-211ENST00000469858 C4orf3Q8WVX3 66 aa13.78□□□□□ -0.2
SMC4-211ENST00000469858 ZFP30Q9Y2G7 519 aa13.78□□□□□ -0.2
SMC4-211ENST00000469858 GATCO43716 136 aaKnown RBP13.78□□□□□ -0.2
SMC4-211ENST00000469858 CA1P00915 261 aaPredicted RBP13.78□□□□□ -0.2
SMC4-211ENST00000469858 REC114Q7Z4M0 266 aa13.78□□□□□ -0.2
SMC4-211ENST00000469858 KLHL30-AS1Q8NEE0 82 aa13.78□□□□□ -0.2
SMC4-211ENST00000469858 LINC01006Q8NI28 216 aa13.78□□□□□ -0.2
SMC4-211ENST00000469858 BIN3Q9NQY0 253 aa13.78□□□□□ -0.2
SMC4-211ENST00000469858 NF1P21359 2839 aa13.77□□□□□ -0.2
SMC4-211ENST00000469858 A8MWP6 167 aa13.77□□□□□ -0.21
SMC4-211ENST00000469858 PRAC2D3DTV9 90 aa13.77□□□□□ -0.21
SMC4-211ENST00000469858 RAB5BP61020 215 aa13.77□□□□□ -0.21
SMC4-211ENST00000469858 C11orf44Q8N8P7 122 aa13.77□□□□□ -0.21
SMC4-211ENST00000469858 WIPF2Q8TF74 440 aaPredicted RBP13.77□□□□□ -0.21
SMC4-211ENST00000469858 VGLL1Q99990 258 aa13.77□□□□□ -0.21
SMC4-211ENST00000469858 LGALS9O00182 355 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 SLURP1P55000 103 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 GBGT1Q8N5D6 347 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 Q8TAT8 98 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 ZC2HC1AQ96GY0 325 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 JMJD8Q96S16 334 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 C16orf95Q9H693 158 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 NRN1Q9NPD7 142 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 BMI1P35226 326 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 TCL1AP56279 114 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 TCF24Q7RTU0 167 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 OR11H1Q8NG94 326 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 C8orf49Q96NF6 230 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 DUX3Q96PT4 197 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 ZNF492Q9P255 531 aa13.76□□□□□ -0.21
SMC4-211ENST00000469858 LINC01619G3V211 115 aa13.75□□□□□ -0.21
SMC4-211ENST00000469858 FOSL1P15407 271 aa13.75□□□□□ -0.21
SMC4-211ENST00000469858 MRPL53Q96EL3 112 aaKnown RBP13.75□□□□□ -0.21
SMC4-211ENST00000469858 DAZAP1Q96EP5 407 aaKnown RBP13.75□□□□□ -0.21
SMC4-211ENST00000469858 C19orf71A6NCJ1 209 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 HAX1O00165 279 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 SOCS3O14543 225 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 P01737 135 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 TRGC2P03986 189 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 ERCC8Q13216 396 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 DPF1Q92782 380 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 SRD5A3Q9H8P0 318 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 FBLL1A6NHQ2 334 aaKnown RBP13.74□□□□□ -0.21
SMC4-211ENST00000469858 CD28P10747 220 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 KLF5Q13887 457 aaPredicted RBP13.74□□□□□ -0.21
SMC4-211ENST00000469858 BTF3L4Q96K17 158 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 C20orf173Q96LM9 149 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 CLEC5AQ9NY25 188 aa13.74□□□□□ -0.21
SMC4-211ENST00000469858 TYMSP04818 313 aa13.73□□□□□ -0.21
SMC4-211ENST00000469858 ZNF738Q8NE65 137 aa13.73□□□□□ -0.21
SMC4-211ENST00000469858 OR1N2Q8NGR9 330 aa13.73□□□□□ -0.21
SMC4-211ENST00000469858 PRR25Q96S07 402 aa13.73□□□□□ -0.21
SMC4-211ENST00000469858 RPP21Q9H633 154 aaKnown RBP13.73□□□□□ -0.21
SMC4-211ENST00000469858 A0A1W2PRX2 142 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 SMIM27A0A1W2PRY6 76 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 RBAKDNA6NC62 111 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 C2orf70A6NJV1 201 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 CT45A10P0DMU9 189 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1646.8 ms