RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 FAM240BA0A1B0GVZ2 78 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 M0R2N4 97 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 DEFB130BP0DP73 79 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 DEFB130AP0DP74 79 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 RPL29P47914 159 aaKnown RBP11.47□□□□□ -0.57
COL9A3-208ENST00000469802 S100A10P60903 97 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 KIR3DS1Q14943 382 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 PFDN5Q99471 154 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 SLC39A9Q9NUM3 307 aa11.47□□□□□ -0.57
COL9A3-208ENST00000469802 TRAV5A0A0B4J249 113 aa11.46□□□□□ -0.57
COL9A3-208ENST00000469802 S100A11P31949 105 aa11.46□□□□□ -0.57
COL9A3-208ENST00000469802 GUK1Q16774 197 aa11.46□□□□□ -0.57
COL9A3-208ENST00000469802 GFI1BQ5VTD9 330 aa11.46□□□□□ -0.57
COL9A3-208ENST00000469802 ZNF493Q6ZR52 646 aa11.46□□□□□ -0.57
COL9A3-208ENST00000469802 STX12Q86Y82 276 aa11.46□□□□□ -0.57
COL9A3-208ENST00000469802 TMEM263Q8WUH6 116 aaKnown RBP11.46□□□□□ -0.57
COL9A3-208ENST00000469802 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
COL9A3-208ENST00000469802 PARD6GQ9BYG4 376 aaPredicted RBP11.46□□□□□ -0.57
COL9A3-208ENST00000469802 IGLV2-18A0A075B6J9 118 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 PRSS29PA6NIE9 313 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 H7BYZ3 331 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 ZNF253O75346 499 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 HBG1P69891 147 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 HBG2P69892 147 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 BAXQ07812 192 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 FCN2Q15485 313 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 MZT2BQ6NZ67 158 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 OR10J6PQ8NGY7 276 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 ZNF586Q9NXT0 402 aa11.45□□□□□ -0.58
COL9A3-208ENST00000469802 TIMM8BQ9Y5J9 83 aaPredicted RBP11.45□□□□□ -0.58
COL9A3-208ENST00000469802 CBY3A6NI87 242 aa11.44□□□□□ -0.58
COL9A3-208ENST00000469802 NPIPB6E9PJ23 425 aa11.44□□□□□ -0.58
COL9A3-208ENST00000469802 ATP5G1P05496 136 aa11.44□□□□□ -0.58
COL9A3-208ENST00000469802 ATP5G3P48201 142 aa11.44□□□□□ -0.58
COL9A3-208ENST00000469802 FAM3BP58499 235 aaPredicted RBP11.44□□□□□ -0.58
COL9A3-208ENST00000469802 LINC00612Q8N6U2 182 aa11.44□□□□□ -0.58
COL9A3-208ENST00000469802 TMEM14CQ9P0S9 112 aa11.44□□□□□ -0.58
COL9A3-208ENST00000469802 TRBV19A0A075B6N1 114 aa11.43□□□□□ -0.58
COL9A3-208ENST00000469802 MPDU1O75352 247 aa11.43□□□□□ -0.58
COL9A3-208ENST00000469802 UPK1BO75841 260 aa11.43□□□□□ -0.58
COL9A3-208ENST00000469802 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
COL9A3-208ENST00000469802 FGF7P21781 194 aa11.43□□□□□ -0.58
COL9A3-208ENST00000469802 ATP6V1FQ16864 119 aa11.43□□□□□ -0.58
COL9A3-208ENST00000469802 MRPL53Q96EL3 112 aaKnown RBP11.43□□□□□ -0.58
COL9A3-208ENST00000469802 NPCDR1Q9BY65 106 aa11.43□□□□□ -0.58
COL9A3-208ENST00000469802 DNAH11Q96DT5 4516 aa11.43□□□□□ -0.58
COL9A3-208ENST00000469802 DYNC1H1Q14204 4646 aaKnown RBP11.42□□□□□ -0.58
COL9A3-208ENST00000469802 F5H768 121 aa11.42□□□□□ -0.58
COL9A3-208ENST00000469802 HTN1P15515 57 aa11.42□□□□□ -0.58
COL9A3-208ENST00000469802 KRTAP17-1Q9BYP8 105 aa11.42□□□□□ -0.58
COL9A3-208ENST00000469802 GPN1Q9HCN4 374 aaPredicted RBP11.42□□□□□ -0.58
COL9A3-208ENST00000469802 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
COL9A3-208ENST00000469802 NDUFB4O95168 129 aa11.41□□□□□ -0.58
COL9A3-208ENST00000469802 PDE6HQ13956 83 aa11.41□□□□□ -0.58
COL9A3-208ENST00000469802 M0R3E3 92 aa11.4□□□□□ -0.58
COL9A3-208ENST00000469802 HIST1H1EP10412 219 aaKnown RBP11.4□□□□□ -0.58
COL9A3-208ENST00000469802 LEPP41159 167 aa11.4□□□□□ -0.58
COL9A3-208ENST00000469802 IFITM3Q01628 133 aa11.4□□□□□ -0.58
COL9A3-208ENST00000469802 GCSAMLQ5JQS6 135 aa11.4□□□□□ -0.58
COL9A3-208ENST00000469802 ENKURQ8TC29 256 aa11.4□□□□□ -0.58
COL9A3-208ENST00000469802 FAM19A4Q96LR4 140 aa11.4□□□□□ -0.58
COL9A3-208ENST00000469802 NMES1Q9C002 83 aa11.4□□□□□ -0.58
COL9A3-208ENST00000469802 SIX6O95475 246 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 PYYP10082 97 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 NHLH2Q02577 135 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 OR5C1Q8NGR4 320 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 ZNRF2Q8NHG8 242 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 RNF141Q8WVD5 230 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 SLC25A2Q9BXI2 301 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 OR5AC2Q9NZP5 309 aa11.39□□□□□ -0.59
COL9A3-208ENST00000469802 TRAV12-3A0A0B4J271 114 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 KLLNB2CW77 178 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 E5RGE8 158 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 H0YIZ8 118 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 PRAF2O60831 178 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 DEFA1P59665 94 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 DEFA3P59666 94 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 CCDC28AQ8IWP9 274 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 THAP6Q8TBB0 222 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 PYGO2Q9BRQ0 406 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 ATG101Q9BSB4 218 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 PRELID1Q9Y255 219 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
COL9A3-208ENST00000469802 J3KRW8 73 aa11.37□□□□□ -0.59
COL9A3-208ENST00000469802 NUDT3O95989 172 aa11.37□□□□□ -0.59
COL9A3-208ENST00000469802 SLC25A5P05141 298 aaKnown RBP11.37□□□□□ -0.59
COL9A3-208ENST00000469802 SOHLH1Q5JUK2 328 aa11.37□□□□□ -0.59
COL9A3-208ENST00000469802 C1orf134Q5TEV5 83 aa11.37□□□□□ -0.59
COL9A3-208ENST00000469802 SLC25A31Q9H0C2 315 aa11.37□□□□□ -0.59
COL9A3-208ENST00000469802 LINC00588Q9Y4M8 146 aa11.37□□□□□ -0.59
COL9A3-208ENST00000469802 C7orf71A4D174 169 aa11.36□□□□□ -0.59
COL9A3-208ENST00000469802 SNURFLB1AK76 121 aa11.36□□□□□ -0.59
COL9A3-208ENST00000469802 HOXA5P20719 270 aa11.36□□□□□ -0.59
COL9A3-208ENST00000469802 H2BFSP57053 126 aa11.36□□□□□ -0.59
COL9A3-208ENST00000469802 DAZ2Q13117 558 aaKnown RBP11.36□□□□□ -0.59
COL9A3-208ENST00000469802 ERCC8Q13216 396 aa11.36□□□□□ -0.59
COL9A3-208ENST00000469802 LRRC37A5PQ49AS3 106 aa11.36□□□□□ -0.59
COL9A3-208ENST00000469802 C9orf47Q6ZRZ4 202 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms