RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 NPIPB5A8MRT5 1133 aa13.95□□□□□ -0.18
MCF2L-221ENST00000469415 IGLC2P0DOY2 106 aa13.95□□□□□ -0.18
MCF2L-221ENST00000469415 PPIFP30405 207 aaKnown RBP13.95□□□□□ -0.18
MCF2L-221ENST00000469415 RNF182Q8N6D2 247 aa13.95□□□□□ -0.18
MCF2L-221ENST00000469415 CUBNO60494 3623 aa13.95□□□□□ -0.18
MCF2L-221ENST00000469415 M0R1W7 72 aa13.95□□□□□ -0.18
MCF2L-221ENST00000469415 CLEC19AQ6UXS0 136 aa13.95□□□□□ -0.18
MCF2L-221ENST00000469415 C1RLQ9NZP8 487 aa13.95□□□□□ -0.18
MCF2L-221ENST00000469415 A0A1B0GXF2 115 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 CBY3A6NI87 242 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 ATP6V0E1O15342 81 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 NDUFA3O95167 84 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 CT45A10P0DMU9 189 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 RNF5Q99942 180 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 PTPN13Q12923 2485 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 TMEM213A2RRL7 107 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 K7EQM0 130 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 NPBQ8NG41 125 aa13.94□□□□□ -0.18
MCF2L-221ENST00000469415 J3KRW8 73 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 CTSGP08311 255 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 ERCC8Q13216 396 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 CCDC144NLQ6NUI1 221 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 VGLL1Q99990 258 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 IGSF10Q6WRI0 2623 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 PSG3Q16557 428 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 LBHQ53QV2 105 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-221ENST00000469415 IGKV3-7A0A075B6H7 116 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 RHOGP84095 191 aa13.93□□□□□ -0.18
MCF2L-221ENST00000469415 SORL1Q92673 2214 aa13.92□□□□□ -0.18
MCF2L-221ENST00000469415 RPLP1P05386 114 aaKnown RBP13.92□□□□□ -0.18
MCF2L-221ENST00000469415 CSN1S1P47710 185 aa13.92□□□□□ -0.18
MCF2L-221ENST00000469415 LY6EQ16553 131 aa13.92□□□□□ -0.18
MCF2L-221ENST00000469415 PIP4P2Q8N4L2 257 aa13.92□□□□□ -0.18
MCF2L-221ENST00000469415 Q8N9W7 124 aa13.92□□□□□ -0.18
MCF2L-221ENST00000469415 TMEM14CQ9P0S9 112 aa13.92□□□□□ -0.18
MCF2L-221ENST00000469415 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.92□□□□□ -0.18
MCF2L-221ENST00000469415 EGR2P11161 476 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-221ENST00000469415 WIPF2Q8TF74 440 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-221ENST00000469415 THYN1Q9P016 225 aa13.92□□□□□ -0.18
MCF2L-221ENST00000469415 FAM106CPP0CH98 169 aa13.91□□□□□ -0.18
MCF2L-221ENST00000469415 A0A1B0GUT8 65 aa13.91□□□□□ -0.18
MCF2L-221ENST00000469415 SMKR1H3BMG3 65 aa13.91□□□□□ -0.18
MCF2L-221ENST00000469415 RAB4AP20338 218 aa13.91□□□□□ -0.18
MCF2L-221ENST00000469415 HINT1P49773 126 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-221ENST00000469415 hDV102S1A0JD36 115 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 OR4B1Q8NGF8 309 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 C20orf144Q9BQM9 153 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 FAM106AQ4KMX7 169 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 LYZL1Q6UWQ5 148 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 ZNF462Q96JM2 2506 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 ABCA2Q9BZC7 2435 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 IGHV1-24A0A0C4DH33 117 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 WI2-2373I1.2A0A1W2PRP0 233 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 PRAC2D3DTV9 90 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 APOHP02749 345 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-221ENST00000469415 HNRNPA3P51991 378 aaKnown RBP13.9□□□□□ -0.18
MCF2L-221ENST00000469415 WFDC3Q8IUB2 231 aa13.9□□□□□ -0.18
MCF2L-221ENST00000469415 SETD2Q9BYW2 2564 aaPredicted RBP13.9□□□□□ -0.19
MCF2L-221ENST00000469415 LEPROTL1O95214 131 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 ORM1P02763 201 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 LCNL1Q6ZST4 164 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 SIRPDQ9H106 197 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 ZNF492Q9P255 531 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 RABAC1Q9UI14 185 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 MRPS12O15235 138 aaKnown RBP13.89□□□□□ -0.19
MCF2L-221ENST00000469415 SNAI2O43623 268 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 LINC00614P0C842 121 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 ATP5L2Q7Z4Y8 100 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 AMN1Q8IY45 258 aa13.89□□□□□ -0.19
MCF2L-221ENST00000469415 TMEM189A5PLL7 270 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 SH2D1AO60880 128 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 ZNF80P51504 273 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-221ENST00000469415 NCR2O95944 276 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 EFNA4P52798 201 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 RASL11AQ6T310 242 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 DTX2Q86UW9 622 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 TTC9CQ8N5M4 171 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 PRSS3P2Q8NHM4 247 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 NRGNQ92686 78 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 SMAD5-AS1Q9Y6J3 95 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 IGLL1P15814 213 aa13.88□□□□□ -0.19
MCF2L-221ENST00000469415 TRAV30A0A087WSZ9 112 aa13.87□□□□□ -0.19
MCF2L-221ENST00000469415 IGHV2-70DA0A0C4DH43 119 aa13.87□□□□□ -0.19
MCF2L-221ENST00000469415 C2orf70A6NJV1 201 aa13.87□□□□□ -0.19
MCF2L-221ENST00000469415 IGLC3P0DOY3 106 aa13.87□□□□□ -0.19
MCF2L-221ENST00000469415 ITLN2Q8WWU7 325 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-221ENST00000469415 MSRB1Q9NZV6 116 aa13.87□□□□□ -0.19
MCF2L-221ENST00000469415 DEFB1P60022 68 aa13.87□□□□□ -0.19
MCF2L-221ENST00000469415 LMO4P61968 165 aa13.87□□□□□ -0.19
MCF2L-221ENST00000469415 SONP18583 2426 aaKnown RBP13.87□□□□□ -0.19
MCF2L-221ENST00000469415 TRAV40A0A0B4J280 105 aa13.86□□□□□ -0.19
MCF2L-221ENST00000469415 OR4C46A6NHA9 309 aa13.86□□□□□ -0.19
MCF2L-221ENST00000469415 SPRY2O43597 315 aa13.86□□□□□ -0.19
MCF2L-221ENST00000469415 LOXL1Q08397 574 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-221ENST00000469415 Q6ZQT7 251 aa13.86□□□□□ -0.19
MCF2L-221ENST00000469415 TMEM70Q9BUB7 260 aa13.86□□□□□ -0.19
MCF2L-221ENST00000469415 MYO9AB2RTY4 2548 aa13.86□□□□□ -0.19
MCF2L-221ENST00000469415 NOTCH3Q9UM47 2321 aa13.86□□□□□ -0.19
MCF2L-221ENST00000469415 IGHV3-11P01762 117 aa13.86□□□□□ -0.19
MCF2L-221ENST00000469415 RPL7P18124 248 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms