RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
LIMS2-213ENST00000469300 RASL11AQ6T310 242 aa12.12□□□□□ -0.47
LIMS2-213ENST00000469300 IGKV2-40A0A087WW87 121 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-213ENST00000469300 IGKV2D-40P01614 121 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-213ENST00000469300 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
LIMS2-213ENST00000469300 SRRM4A7MD48 611 aaKnown RBP12.12□□□□□ -0.47
LIMS2-213ENST00000469300 PSG3Q16557 428 aa12.12□□□□□ -0.47
LIMS2-213ENST00000469300 SPAG8Q99932 426 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-213ENST00000469300 ELANEP08246 267 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 FOXC2Q99958 501 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
LIMS2-213ENST00000469300 ADCYAP1P18509 176 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 TMEM95Q3KNT9 176 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 KRTAP27-1Q3LI81 207 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 CD5LO43866 347 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 INSP01308 110 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 DUX4L9Q6RFH8 374 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-213ENST00000469300 SYNJ2BPP57105 145 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 PRADC1Q9BSG0 188 aa12.11□□□□□ -0.47
LIMS2-213ENST00000469300 H3BUA1 57 aa12.1□□□□□ -0.47
LIMS2-213ENST00000469300 ZNRD1Q9P1U0 126 aa12.1□□□□□ -0.47
LIMS2-213ENST00000469300 YLPM1P49750 1951 aaKnown RBP12.1□□□□□ -0.47
LIMS2-213ENST00000469300 LINC01619G3V211 115 aa12.1□□□□□ -0.47
LIMS2-213ENST00000469300 NDPQ00604 133 aa12.1□□□□□ -0.47
LIMS2-213ENST00000469300 DEFB113Q30KQ7 82 aa12.1□□□□□ -0.47
LIMS2-213ENST00000469300 TMEM256Q8N2U0 113 aa12.1□□□□□ -0.47
LIMS2-213ENST00000469300 MAPK1IP1LQ8NDC0 245 aa12.1□□□□□ -0.47
LIMS2-213ENST00000469300 CHCHD1Q96BP2 118 aaKnown RBP12.1□□□□□ -0.47
LIMS2-213ENST00000469300 GRNP28799 593 aaKnown RBP12.09□□□□□ -0.47
LIMS2-213ENST00000469300 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 FCN3O75636 299 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 PLXNB3Q9ULL4 1909 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 C22orf46C9J442 243 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 NDUFA4O00483 81 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 HOXA3O43365 443 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-213ENST00000469300 LHBP01229 141 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 HBDP02042 147 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 DPH3Q96FX2 82 aa12.09□□□□□ -0.47
LIMS2-213ENST00000469300 ADORA2A-AS1P86434 159 aa12.08□□□□□ -0.47
LIMS2-213ENST00000469300 ACTL10Q5JWF8 245 aa12.08□□□□□ -0.47
LIMS2-213ENST00000469300 OR13C6PQ8NH95 151 aa12.08□□□□□ -0.48
LIMS2-213ENST00000469300 MCRIP2Q9BUT9 160 aaKnown RBP12.08□□□□□ -0.48
LIMS2-213ENST00000469300 TRAV8-4A0A0B4J246 113 aa12.08□□□□□ -0.48
LIMS2-213ENST00000469300 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
LIMS2-213ENST00000469300 CYYR1Q96J86 154 aa12.08□□□□□ -0.48
LIMS2-213ENST00000469300 OR11H6Q8NGC7 330 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 PRB4P10163 310 aaPredicted RBP12.07□□□□□ -0.48
LIMS2-213ENST00000469300 RPL36AP83881 106 aaKnown RBP12.07□□□□□ -0.48
LIMS2-213ENST00000469300 MLANAQ16655 118 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 CFAP161Q6P656 301 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 RPL36ALQ969Q0 106 aaKnown RBP12.07□□□□□ -0.48
LIMS2-213ENST00000469300 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 PLA2G5P39877 138 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 MMP23AO75900 390 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 C3orf79P0CE67 100 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 CNTFRP26992 372 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 PPIFP30405 207 aaKnown RBP12.07□□□□□ -0.48
LIMS2-213ENST00000469300 SLC25A2Q9BXI2 301 aa12.07□□□□□ -0.48
LIMS2-213ENST00000469300 ZNF48Q96MX3 618 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-213ENST00000469300 CTSZQ9UBR2 303 aa12.06□□□□□ -0.48
LIMS2-213ENST00000469300 G3V318 75 aa12.06□□□□□ -0.48
LIMS2-213ENST00000469300 NAA38Q9BRA0 125 aaKnown RBP12.06□□□□□ -0.48
LIMS2-213ENST00000469300 ZNF134P52741 427 aa12.06□□□□□ -0.48
LIMS2-213ENST00000469300 SFTA2Q6UW10 78 aa12.06□□□□□ -0.48
LIMS2-213ENST00000469300 IGKV1-39P01597 117 aa12.05□□□□□ -0.48
LIMS2-213ENST00000469300 IGKV1D-39P04432 117 aa12.05□□□□□ -0.48
LIMS2-213ENST00000469300 DPH3P1Q9H4G8 78 aa12.05□□□□□ -0.48
LIMS2-213ENST00000469300 POLR3KQ9Y2Y1 108 aaPredicted RBP12.05□□□□□ -0.48
LIMS2-213ENST00000469300 DPM2O94777 84 aa12.05□□□□□ -0.48
LIMS2-213ENST00000469300 SEM1Q6ZVN7 128 aa12.05□□□□□ -0.48
LIMS2-213ENST00000469300 LIME1Q9H400 295 aa12.05□□□□□ -0.48
LIMS2-213ENST00000469300 VPREB3Q9UKI3 123 aa12.05□□□□□ -0.48
LIMS2-213ENST00000469300 C9JQL5 133 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 NDUFS7O75251 213 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 PLCE1Q9P212 2302 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 DEFB131AP59861 70 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 SH2D1AO60880 128 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 MRPL27Q9P0M9 148 aaKnown RBP12.04□□□□□ -0.48
LIMS2-213ENST00000469300 PRR14LQ5THK1 2151 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 WT1-ASQ06250 92 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 CHCHD5Q9BSY4 110 aa12.04□□□□□ -0.48
LIMS2-213ENST00000469300 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
LIMS2-213ENST00000469300 BCL6BQ8N143 479 aaPredicted RBP12.03□□□□□ -0.48
LIMS2-213ENST00000469300 FREM1Q5H8C1 2179 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 WIPF3A6NGB9 483 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 CRPP02741 224 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 PAX9P55771 341 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 TRGV1A0A0A0MS02 117 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 C10orf105Q8TEF2 133 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 SELENOKQ9Y6D0 94 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 A0A087X0K7 114 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 LYZL1Q6UWQ5 148 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 Q86TA4 180 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 Q8NA96 180 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 IFI27L1Q96BM0 104 aa12.03□□□□□ -0.48
LIMS2-213ENST00000469300 RPL35AP18077 110 aaKnown RBP12.02□□□□□ -0.48
LIMS2-213ENST00000469300 WFDC12Q8WWY7 111 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms