RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 ERVFC1-1P60608 527 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 PAFAH1B2P68402 229 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 ZNF726P1Q15940 193 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 FAM24BQ8N5W8 94 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 TMEM116Q8NCL8 245 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 SUN5Q8TC36 379 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 NIPSNAP3BQ9BS92 247 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 NPCDR1Q9BY65 106 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 KRTAP1-5Q9BYS1 174 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 VSIRQ9H7M9 311 aa7.42□□□□□ -1.22
TRAIP-202ENST00000469027 IGHV3OR16-13A0A075B7E8 117 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 IGHV3-74A0A0B4J1X5 117 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 TEX50A0A1B0GTY4 177 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 A0A1B0GV50 99 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 FNDC10F2Z333 226 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 C17orf112F2Z3M2 114 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 INS-IGF2F8WCM5 200 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 MPDU1O75352 247 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 MBP02144 154 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 OR13C7P0DN81 318 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 PPT1P50897 306 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 ATP5IP56385 69 aaPredicted RBP7.41□□□□□ -1.22
TRAIP-202ENST00000469027 CCL20P78556 96 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 BSXQ3C1V8 233 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 ZNF506Q5JVG8 444 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 SFT2D1Q8WV19 159 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 COMMD5Q9GZQ3 224 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 EIF5A2Q9GZV4 153 aaKnown RBP7.41□□□□□ -1.22
TRAIP-202ENST00000469027 Q9H8V8 135 aa7.41□□□□□ -1.22
TRAIP-202ENST00000469027 F11RQ9Y624 299 aaKnown RBP7.41□□□□□ -1.22
TRAIP-202ENST00000469027 CTXND1A0A1B0GTU2 59 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 LOC102723971A0A1B0GUV8 181 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 A0A1W2PPQ1 181 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 MAP1LC3B2A6NCE7 125 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 RBFOX3A6NFN3 312 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 DNASE2O00115 360 aaPredicted RBP7.4□□□□□ -1.22
TRAIP-202ENST00000469027 NUPL2O15504 423 aaKnown RBP7.4□□□□□ -1.22
TRAIP-202ENST00000469027 SNAPINO95295 136 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 GCSHP23434 173 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 BTN1A1Q13410 526 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 Q56UQ5 140 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 FFAR4Q5NUL3 377 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 TRPT1Q86TN4 253 aaKnown RBP7.4□□□□□ -1.22
TRAIP-202ENST00000469027 ZNF709Q8N972 641 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 OR1L8Q8NGR8 309 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 HINT2Q9BX68 163 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 MAP1LC3BQ9GZQ8 125 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 KCNIP2Q9NS61 270 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 LINC00588Q9Y4M8 146 aa7.4□□□□□ -1.22
TRAIP-202ENST00000469027 TEX48A0A1B0GUV7 120 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 TMEM189A5PLL7 270 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 CYB5BO43169 146 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 APOHP02749 345 aaPredicted RBP7.39□□□□□ -1.23
TRAIP-202ENST00000469027 RNASE2P10153 161 aaKnown RBP7.39□□□□□ -1.23
TRAIP-202ENST00000469027 OPRK1P41145 380 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 NPBWR1P48145 328 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 ACOT6Q3I5F7 207 aaPredicted RBP7.39□□□□□ -1.23
TRAIP-202ENST00000469027 C2orf83Q53S99 150 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 KHDC3LQ587J8 217 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 FAM222AQ5U5X8 452 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 TCF24Q7RTU0 167 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 SLC35B3Q9H1N7 401 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 MS4A6AQ9H2W1 248 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 FNDC4Q9H6D8 234 aaPredicted RBP7.39□□□□□ -1.23
TRAIP-202ENST00000469027 NDUFA4L2Q9NRX3 87 aa7.39□□□□□ -1.23
TRAIP-202ENST00000469027 SMCO3A2RU48 225 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 FAM74A7A6NL05 159 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 KNCNA6PVL3 124 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 YIF1AO95070 293 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 IFNA1P01562 189 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 SRP19P09132 144 aaKnown RBP7.38□□□□□ -1.23
TRAIP-202ENST00000469027 BCL2P10415 239 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 RELQ04864 619 aaPredicted RBP7.38□□□□□ -1.23
TRAIP-202ENST00000469027 USF2Q15853 346 aaPredicted RBP7.38□□□□□ -1.23
TRAIP-202ENST00000469027 FAM74A3Q4VXF1 159 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 FAM122CQ6P4D5 195 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 LCN15Q6UWW0 184 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.38□□□□□ -1.23
TRAIP-202ENST00000469027 CSNK1G2-AS1Q8NCQ2 148 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 OR10G4Q8NGN3 311 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 OR10G9Q8NGN4 311 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 OR10G7Q8NGN6 311 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 MGST2Q99735 147 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 ACTR3CQ9C0K3 210 aaPredicted RBP7.38□□□□□ -1.23
TRAIP-202ENST00000469027 Q9H3A6 140 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 SLC25A22Q9H936 323 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 NPVFQ9HCQ7 196 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 ZNF586Q9NXT0 402 aa7.38□□□□□ -1.23
TRAIP-202ENST00000469027 TMA7Q9Y2S6 64 aaKnown RBP7.38□□□□□ -1.23
TRAIP-202ENST00000469027 TRAV2A0A0B4J234 112 aa7.37□□□□□ -1.23
TRAIP-202ENST00000469027 I3L2K1 104 aa7.37□□□□□ -1.23
TRAIP-202ENST00000469027 CDC34P49427 236 aaPredicted RBP7.37□□□□□ -1.23
TRAIP-202ENST00000469027 FGF8P55075 233 aaPredicted RBP7.37□□□□□ -1.23
TRAIP-202ENST00000469027 DAD1P61803 113 aa7.37□□□□□ -1.23
TRAIP-202ENST00000469027 RPL11P62913 178 aaKnown RBP7.37□□□□□ -1.23
TRAIP-202ENST00000469027 ERHP84090 104 aaKnown RBP7.37□□□□□ -1.23
TRAIP-202ENST00000469027 LINC00528Q8N1L1 170 aa7.37□□□□□ -1.23
TRAIP-202ENST00000469027 RXFP4Q8TDU9 374 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms