RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 BOLA2-SMG1P6H3BVE0 249 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 ARPC5O15511 151 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 JTBO76095 146 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 NDUFB4O95168 129 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 ATP6V0CP27449 155 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 ZFAND6Q6FIF0 208 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 PQLC2Q6ZP29 291 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 LYPD1Q8N2G4 141 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 OR10G4Q8NGN3 311 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 FXYD5Q96DB9 178 aa10.72□□□□□ -0.69
TMEM39A-205ENST00000468676 IGHV4-28A0A0C4DH34 117 aa10.71□□□□□ -0.69
TMEM39A-205ENST00000468676 HMSDA8MTL9 139 aa10.71□□□□□ -0.69
TMEM39A-205ENST00000468676 INSP01308 110 aa10.71□□□□□ -0.69
TMEM39A-205ENST00000468676 OR10J4P0C629 311 aa10.71□□□□□ -0.69
TMEM39A-205ENST00000468676 TSPOP30536 169 aa10.71□□□□□ -0.69
TMEM39A-205ENST00000468676 RPL7L1Q6DKI1 246 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-205ENST00000468676 RFNGQ9Y644 331 aa10.71□□□□□ -0.69
TMEM39A-205ENST00000468676 TMEM189A5PLL7 270 aa10.7□□□□□ -0.7
TMEM39A-205ENST00000468676 M0R2Z0 102 aa10.7□□□□□ -0.7
TMEM39A-205ENST00000468676 RAB2AP61019 212 aa10.7□□□□□ -0.7
TMEM39A-205ENST00000468676 UBE2L3P68036 154 aaKnown RBP10.7□□□□□ -0.7
TMEM39A-205ENST00000468676 ZNF345Q14585 488 aa10.7□□□□□ -0.7
TMEM39A-205ENST00000468676 SPINK13Q1W4C9 94 aa10.7□□□□□ -0.7
TMEM39A-205ENST00000468676 C11orf45Q8TAV5 145 aa10.7□□□□□ -0.7
TMEM39A-205ENST00000468676 ODF3Q96PU9 254 aa10.7□□□□□ -0.7
TMEM39A-205ENST00000468676 IGHV3OR16-12A0A075B7B8 117 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 CXorf65A6NEN9 183 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 NPIPB6E9PJ23 425 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 DEFB4AO15263 64 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 HBE1P02100 147 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 RBMY1A1P0DJD3 496 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 RBMY1CP0DJD4 496 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 CDKN1BP46527 198 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 CDC34P49427 236 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 ICAM4Q14773 271 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 FAM122CQ6P4D5 195 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 TMEM256Q8N2U0 113 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 EXOC3-AS1Q8N2X6 119 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 ZNF503Q96F45 646 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 TMEM208Q9BTX3 173 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 TENM2Q9NT68 2774 aa10.69□□□□□ -0.7
TMEM39A-205ENST00000468676 A0A0D9SG52 128 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 NUPR2A6NF83 97 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 M0R3E3 92 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 CRXO43186 299 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 CSN1S1P47710 185 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 Q6ZNX1 250 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 C1orf158Q8N1D5 194 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 KCNRGQ8N5I3 272 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 RPP25LQ8N5L8 163 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 ACTR3CQ9C0K3 210 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 SH3BGRL3Q9H299 93 aa10.68□□□□□ -0.7
TMEM39A-205ENST00000468676 LEPP41159 167 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 RANP62826 216 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 RRN3P1Q2M238 152 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 FAM74A1Q5RGS3 127 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 RXFP4Q8TDU9 374 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 PHYHIPLQ96FC7 376 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 ARPC5LQ9BPX5 153 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 C20orf144Q9BQM9 153 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 CSMD3Q7Z407 3707 aa10.67□□□□□ -0.7
TMEM39A-205ENST00000468676 TEX48A0A1B0GUV7 120 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 STAG3L2P0CL84 134 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 STAG3L3P0CL85 134 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 PMS2P11Q13670 270 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 BAP18Q8IXM2 172 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 ARL6IP6Q8N6S5 226 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 OR11H4Q8NGC9 324 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 Q9H3A6 140 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 CYTL1Q9NRR1 136 aa10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 KLK5Q9Y337 293 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-205ENST00000468676 TRAV12-2A0A075B6T6 113 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 RBAKDNA6NC62 111 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 CXorf1O96002 111 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 NMBP08949 121 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 ARL14EPLP0DKL9 152 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 CT45A10P0DMU9 189 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 AKR1C8PQ5T2L2 129 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 OTORQ9NRC9 128 aa10.65□□□□□ -0.7
TMEM39A-205ENST00000468676 LOC102723971A0A1B0GUV8 181 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 KANTRA0A1W2PQU2 76 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 C11orf94C9JXX5 98 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 SLC25A5P05141 298 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 SPART-AS1P0CW21 52 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 NANOS2P60321 138 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 EIF5AP63241 154 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 TCTE3Q8IZS6 198 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 PHLDA1Q8WV24 401 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms