RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 OR7C2O60412 319 aa14.51□□□□□ -0.09
NPHP4-206ENST00000468253 ZNF705DP0CH99 300 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-206ENST00000468253 ZNF705BP0CI00 300 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-206ENST00000468253 HIST1H1AQ02539 215 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-206ENST00000468253 CASC10Q5T4H9 136 aa14.51□□□□□ -0.09
NPHP4-206ENST00000468253 KCNRGQ8N5I3 272 aa14.51□□□□□ -0.09
NPHP4-206ENST00000468253 RPP25LQ8N5L8 163 aaKnown RBP14.51□□□□□ -0.09
NPHP4-206ENST00000468253 BLNKQ8WV28 456 aa14.51□□□□□ -0.09
NPHP4-206ENST00000468253 IGF2BP2-AS1Q96M15 143 aa14.51□□□□□ -0.09
NPHP4-206ENST00000468253 AAMDCQ9H7C9 122 aa14.51□□□□□ -0.09
NPHP4-206ENST00000468253 A0A0D9SG52 128 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 PRAC2D3DTV9 90 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 FXYD7P58549 80 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 RAB2AP61019 212 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 Q8NAQ8 132 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 OR11H4Q8NGC9 324 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 CYTL1Q9NRR1 136 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 PPP1R14DQ9NXH3 145 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 GOLT1BQ9Y3E0 138 aa14.5□□□□□ -0.09
NPHP4-206ENST00000468253 ST6GAL2Q96JF0 529 aa14.49□□□□□ -0.09
NPHP4-206ENST00000468253 BOLA2-SMG1P6H3BVE0 249 aa14.48□□□□□ -0.09
NPHP4-206ENST00000468253 OR10J4P0C629 311 aa14.48□□□□□ -0.09
NPHP4-206ENST00000468253 LINC00477Q96M19 166 aa14.48□□□□□ -0.09
NPHP4-206ENST00000468253 ODF3Q96PU9 254 aa14.48□□□□□ -0.09
NPHP4-206ENST00000468253 IGHV4-28A0A0C4DH34 117 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 CRXO43186 299 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-206ENST00000468253 RBMY1A1P0DJD3 496 aaKnown RBP14.47□□□□□ -0.09
NPHP4-206ENST00000468253 RBMY1CP0DJD4 496 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 TSPOP30536 169 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 UBE2L3P68036 154 aaKnown RBP14.47□□□□□ -0.09
NPHP4-206ENST00000468253 ICAM4Q14773 271 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 RBMY1FQ15415 496 aaKnown RBP14.47□□□□□ -0.09
NPHP4-206ENST00000468253 FAM122CQ6P4D5 195 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 TCTE3Q8IZS6 198 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 C1orf158Q8N1D5 194 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 EXOC3-AS1Q8N2X6 119 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 ARL6IP6Q8N6S5 226 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 ARPC5LQ9BPX5 153 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 ACTR3CQ9C0K3 210 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-206ENST00000468253 SH3BGRL3Q9H299 93 aa14.47□□□□□ -0.09
NPHP4-206ENST00000468253 NPIPB6E9PJ23 425 aa14.46□□□□□ -0.09
NPHP4-206ENST00000468253 M0R3E3 92 aa14.46□□□□□ -0.09
NPHP4-206ENST00000468253 STAG3L2P0CL84 134 aa14.46□□□□□ -0.09
NPHP4-206ENST00000468253 STAG3L3P0CL85 134 aa14.46□□□□□ -0.09
NPHP4-206ENST00000468253 CDKN1BP46527 198 aa14.46□□□□□ -0.09
NPHP4-206ENST00000468253 CDC34P49427 236 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-206ENST00000468253 RANP62826 216 aaKnown RBP14.46□□□□□ -0.09
NPHP4-206ENST00000468253 SPINK13Q1W4C9 94 aa14.46□□□□□ -0.09
NPHP4-206ENST00000468253 SUN5Q8TC36 379 aa14.46□□□□□ -0.09
NPHP4-206ENST00000468253 RAB24Q969Q5 203 aa14.46□□□□□ -0.09
NPHP4-206ENST00000468253 TMEM189A5PLL7 270 aa14.45□□□□□ -0.1
NPHP4-206ENST00000468253 M0R2Z0 102 aa14.45□□□□□ -0.1
NPHP4-206ENST00000468253 C9orf47Q6ZRZ4 202 aa14.45□□□□□ -0.1
NPHP4-206ENST00000468253 RXFP4Q8TDU9 374 aa14.45□□□□□ -0.1
NPHP4-206ENST00000468253 INSP01308 110 aa14.44□□□□□ -0.1
NPHP4-206ENST00000468253 CT45A10P0DMU9 189 aa14.44□□□□□ -0.1
NPHP4-206ENST00000468253 CSN1S1P47710 185 aa14.44□□□□□ -0.1
NPHP4-206ENST00000468253 TMEM256Q8N2U0 113 aa14.44□□□□□ -0.1
NPHP4-206ENST00000468253 C11orf45Q8TAV5 145 aa14.44□□□□□ -0.1
NPHP4-206ENST00000468253 PHYHIPLQ96FC7 376 aa14.44□□□□□ -0.1
NPHP4-206ENST00000468253 C20orf144Q9BQM9 153 aa14.44□□□□□ -0.1
NPHP4-206ENST00000468253 Q9H3A6 140 aa14.44□□□□□ -0.1
NPHP4-206ENST00000468253 CSMD3Q7Z407 3707 aa14.43□□□□□ -0.1
NPHP4-206ENST00000468253 ZFAND6Q6FIF0 208 aa14.43□□□□□ -0.1
NPHP4-206ENST00000468253 AGPAT4-IT1Q9H0P7 198 aa14.43□□□□□ -0.1
NPHP4-206ENST00000468253 OTORQ9NRC9 128 aa14.43□□□□□ -0.1
NPHP4-206ENST00000468253 RBAKDNA6NC62 111 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 DEFB4AO15263 64 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 CXorf1O96002 111 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 HBE1P02100 147 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 SLC25A5P05141 298 aaKnown RBP14.42□□□□□ -0.1
NPHP4-206ENST00000468253 NMBP08949 121 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 LEPP41159 167 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 EIF5AP63241 154 aaKnown RBP14.42□□□□□ -0.1
NPHP4-206ENST00000468253 FAM74A1Q5RGS3 127 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 AKR1C8PQ5T2L2 129 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 TMEM208Q9BTX3 173 aa14.42□□□□□ -0.1
NPHP4-206ENST00000468253 IGHV3OR16-12A0A075B7B8 117 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 TRBV7-9A0A0J9YWB2 115 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 KANTRA0A1W2PQU2 76 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 PGPA6NDG6 321 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 BCL2L11O43521 198 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 SEC11BP0C7V7 166 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 ARL14EPLP0DKL9 152 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 RRN3P1Q2M238 152 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 TMUB2Q71RG4 321 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 FAM19A4Q96LR4 140 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 TMEM167BQ9NRX6 74 aa14.41□□□□□ -0.1
NPHP4-206ENST00000468253 TRAV12-2A0A075B6T6 113 aa14.4□□□□□ -0.1
NPHP4-206ENST00000468253 CTXND1A0A1B0GTU2 59 aa14.4□□□□□ -0.1
NPHP4-206ENST00000468253 HMGB3O15347 200 aaKnown RBP14.4□□□□□ -0.1
NPHP4-206ENST00000468253 EIF3GO75821 320 aaKnown RBP eCLIP14.4□□□□□ -0.1
NPHP4-206ENST00000468253 PRB4P10163 310 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-206ENST00000468253 GCHFRP30047 84 aa14.4□□□□□ -0.1
NPHP4-206ENST00000468253 ERCC8Q13216 396 aa14.4□□□□□ -0.1
NPHP4-206ENST00000468253 BAP18Q8IXM2 172 aa14.4□□□□□ -0.1
NPHP4-206ENST00000468253 CXorf65A6NEN9 183 aa14.39□□□□□ -0.11
NPHP4-206ENST00000468253 DIRC3C9JPN6 131 aa14.39□□□□□ -0.11
NPHP4-206ENST00000468253 C1QBP02746 253 aa14.39□□□□□ -0.11
NPHP4-206ENST00000468253 CRISP2P16562 243 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms