RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 RPL12P30050 165 aaKnown RBP8.25□□□□□ -1.09
CDHR3-205ENST00000468143 KIR3DS1Q14943 382 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 MIR17HGQ75NE6 70 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 BLNKQ8WV28 456 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 LINC01587Q99440 93 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 MBD2Q9UBB5 411 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 HSPB11Q9Y547 144 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 TRBV19A0A075B6N1 114 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 J3KRW8 73 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 GUK1Q16774 197 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 LGALS9CQ6DKI2 356 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 OR10J6PQ8NGY7 276 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 ATP5SQ99766 215 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 SLC25A2Q9BXI2 301 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 TMEM14CQ9P0S9 112 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 TIMM9Q9Y5J7 89 aa8.24□□□□□ -1.09
CDHR3-205ENST00000468143 C17orf112F2Z3M2 114 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 M0R3E3 92 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 NDUFB4O95168 129 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 PTTG1O95997 202 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 PET100P0DJ07 73 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 HIST1H1EP10412 219 aaKnown RBP8.23□□□□□ -1.09
CDHR3-205ENST00000468143 HTN3P15516 51 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 CDKN1BP46527 198 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 ERCC8Q13216 396 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 FCN2Q15485 313 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 EXOC3-AS1Q8N2X6 119 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 NIPSNAP3BQ9BS92 247 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 WFDC1Q9HC57 220 aa8.23□□□□□ -1.09
CDHR3-205ENST00000468143 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 EIF3GO75821 320 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDHR3-205ENST00000468143 IFNA5P01569 189 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 OR10J4P0C629 311 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 CT45A10P0DMU9 189 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 TCTAP57738 103 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 SCGB1C1Q8TD33 95 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 FAM167A-AS1Q96KT0 104 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 MED28Q9H204 178 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 OR51M1Q9H341 326 aa8.22□□□□□ -1.09
CDHR3-205ENST00000468143 ZNF253O75346 499 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 NBEAP1P0C6P0 100 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 DEFB130BP0DP73 79 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 DEFB130AP0DP74 79 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 DAD1P61803 113 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 ICAM4Q14773 271 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 FFAR4Q5NUL3 377 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 PAXXQ9BUH6 204 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 FUT9Q9Y231 359 aa8.21□□□□□ -1.1
CDHR3-205ENST00000468143 TEX48A0A1B0GUV7 120 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 PLAC8L1A1L4L8 177 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 NPIPB6E9PJ23 425 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 TSPOP30536 169 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 TAS2R60P59551 318 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 Q5BKY6 102 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 GFI1BQ5VTD9 330 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 FAM122CQ6P4D5 195 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 RNF141Q8WVD5 230 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 NDUFAF3Q9BU61 184 aa8.2□□□□□ -1.1
CDHR3-205ENST00000468143 MRPL32Q9BYC8 188 aaKnown RBP8.2□□□□□ -1.1
CDHR3-205ENST00000468143 EPPK1P58107 5090 aaKnown RBP8.2□□□□□ -1.1
CDHR3-205ENST00000468143 LYSTQ99698 3801 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 TRAV12-3A0A0B4J271 114 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 OR7C2O60412 319 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 LEPP41159 167 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 TMEM256Q8N2U0 113 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 FXYD5Q96DB9 178 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 AGPAT4-IT1Q9H0P7 198 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 AAMDCQ9H7C9 122 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 PRELID1Q9Y255 219 aa8.19□□□□□ -1.1
CDHR3-205ENST00000468143 IGKV2-40A0A087WW87 121 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-205ENST00000468143 H7BYZ3 331 aa8.18□□□□□ -1.1
CDHR3-205ENST00000468143 IGKV2D-40P01614 121 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-205ENST00000468143 RANP62826 216 aaKnown RBP8.18□□□□□ -1.1
CDHR3-205ENST00000468143 PDE6HQ13956 83 aa8.18□□□□□ -1.1
CDHR3-205ENST00000468143 OXA1LQ15070 435 aa8.18□□□□□ -1.1
CDHR3-205ENST00000468143 MRPL53Q96EL3 112 aaKnown RBP8.18□□□□□ -1.1
CDHR3-205ENST00000468143 PHYHIPLQ96FC7 376 aa8.18□□□□□ -1.1
CDHR3-205ENST00000468143 NOP10Q9NPE3 64 aaKnown RBP8.18□□□□□ -1.1
CDHR3-205ENST00000468143 LYRM9A8MSI8 78 aa8.17□□□□□ -1.1
CDHR3-205ENST00000468143 CCDC28AQ8IWP9 274 aa8.17□□□□□ -1.1
CDHR3-205ENST00000468143 C16orf74Q96GX8 76 aa8.17□□□□□ -1.1
CDHR3-205ENST00000468143 LINC00477Q96M19 166 aa8.17□□□□□ -1.1
CDHR3-205ENST00000468143 VGLL1Q99990 258 aa8.17□□□□□ -1.1
CDHR3-205ENST00000468143 HMGB3O15347 200 aaKnown RBP8.16□□□□□ -1.1
CDHR3-205ENST00000468143 RNASE4P34096 147 aaKnown RBP8.16□□□□□ -1.1
CDHR3-205ENST00000468143 RAB2AP61019 212 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 UBE2L3P68036 154 aaKnown RBP8.16□□□□□ -1.1
CDHR3-205ENST00000468143 CD300CQ08708 224 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 BTN1A1Q13410 526 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 RGS21Q2M5E4 152 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 TMEM88Q6PEY1 159 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 HSD17B11Q8NBQ5 300 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 RNASE8Q8TDE3 154 aaKnown RBP8.16□□□□□ -1.1
CDHR3-205ENST00000468143 FAM19A4Q96LR4 140 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 ODF3Q96PU9 254 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 C20orf144Q9BQM9 153 aa8.16□□□□□ -1.1
CDHR3-205ENST00000468143 TIMM8BQ9Y5J9 83 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms