RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 COX7A2P2O60397 106 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 CRYGCP07315 174 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 FOXC1Q12948 553 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 SHISA2Q6UWI4 295 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 OR1L4Q8NGR5 311 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 OR10X1Q8NGY0 326 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 C20orf78Q9BR46 151 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 CHAC1Q9BUX1 264 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 TM2D2Q9BX73 214 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 TMEM178BH3BS89 294 aa14.33□□□□□ -0.11
SNAPC3-205ENST00000467062 APOMO95445 188 aa14.33□□□□□ -0.11
SNAPC3-205ENST00000467062 GATA3P23771 443 aa14.33□□□□□ -0.11
SNAPC3-205ENST00000467062 INSL3P51460 131 aa14.33□□□□□ -0.11
SNAPC3-205ENST00000467062 LCNL1Q6ZST4 164 aa14.33□□□□□ -0.11
SNAPC3-205ENST00000467062 FMC1Q96HJ9 113 aa14.33□□□□□ -0.11
SNAPC3-205ENST00000467062 MYCNOSP40205 109 aa14.33□□□□□ -0.12
SNAPC3-205ENST00000467062 RIGQ13278 110 aa14.33□□□□□ -0.12
SNAPC3-205ENST00000467062 PDPNQ86YL7 162 aa14.33□□□□□ -0.12
SNAPC3-205ENST00000467062 SYT8Q8NBV8 401 aa14.33□□□□□ -0.12
SNAPC3-205ENST00000467062 SGK494Q96LW2 274 aa14.33□□□□□ -0.12
SNAPC3-205ENST00000467062 LINC00574Q9H8X3 128 aa14.33□□□□□ -0.12
SNAPC3-205ENST00000467062 A0A096LNJ9 63 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 C10orf113Q5VZT2 155 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 CEND1Q8N111 149 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 CDIP1Q9H305 208 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 TPSG1Q9NRR2 321 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 MALRD1Q5VYJ5 2156 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 A0A1B0GUT8 65 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 A0A1B0GWB2 263 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 POU2AF1Q16633 256 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 FXYD5Q96DB9 178 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 PRO0461Q9UI25 63 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 COL12A1Q99715 3063 aa14.32□□□□□ -0.12
SNAPC3-205ENST00000467062 LTAP01374 205 aa14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 RNASE2P10153 161 aaKnown RBP14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 IFI27P40305 119 aaPredicted RBP14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 FOXI1Q12951 378 aa14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 ZNF833PQ6ZTB9 187 aa14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 ATP6V0E2Q8NHE4 81 aa14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 FLYWCH2Q96CP2 140 aaKnown RBP14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 ANAPC13Q9BS18 74 aa14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 PLAUP00749 431 aa14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 RNASE6Q93091 150 aaKnown RBP14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 FAM110AQ9BQ89 295 aa14.31□□□□□ -0.12
SNAPC3-205ENST00000467062 A0A1B0GW15 77 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 PGPA6NDG6 321 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 E7EQL1 145 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 COL8A1P27658 744 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 SRSF1Q07955 248 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 C2orf83Q53S99 150 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 GATD1Q8NB37 220 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 IFI27L1Q96BM0 104 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 DYNLRB1Q9NP97 96 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 NDUFB3O43676 98 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 ENSAO43768 121 aaKnown RBP14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 HBDP02042 147 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 MT-ATP8P03928 68 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 WT1-ASQ06250 92 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 RUSC1-AS1Q66K80 236 aa14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 RALYQ9UKM9 306 aaKnown RBP14.3□□□□□ -0.12
SNAPC3-205ENST00000467062 Q6ZUT4 128 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 ASCL5Q7RTU5 278 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 C1QTNF4Q9BXJ3 329 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 ANKHD1Q8IWZ3 2542 aaKnown RBP14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 IGHV3-21A0A0B4J1V1 117 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 FAM106CPP0CH98 169 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 CD69Q07108 199 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 FAM106AQ4KMX7 169 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 MED13LQ71F56 2210 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 TRBV7-9A0A0J9YWB2 115 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 LINC01560Q8TB33 94 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 NDUFA4L2Q9NRX3 87 aa14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 MRPL36Q9P0J6 103 aaKnown RBP14.29□□□□□ -0.12
SNAPC3-205ENST00000467062 CGB1A6NKQ9 187 aa14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 SHISA9B4DS77 424 aa14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 LOXP28300 417 aaPredicted RBP14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 LOXL1Q08397 574 aaPredicted RBP14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 CACNG8Q8WXS5 425 aa14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 DLL1O00548 723 aa14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 GRNP28799 593 aaKnown RBP14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 HCP5Q6MZN7 132 aa14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 AMTNQ6UX39 209 aa14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 SCNM1Q9BWG6 230 aa14.28□□□□□ -0.12
SNAPC3-205ENST00000467062 COL6A6A6NMZ7 2263 aa14.27□□□□□ -0.12
SNAPC3-205ENST00000467062 OR1L8Q8NGR8 309 aa14.27□□□□□ -0.13
SNAPC3-205ENST00000467062 OSR1Q8TAX0 266 aaPredicted RBP14.27□□□□□ -0.13
SNAPC3-205ENST00000467062 NPIPB3Q92617 1050 aa14.27□□□□□ -0.13
SNAPC3-205ENST00000467062 LOC389332A0A1B0GUA5 103 aa14.27□□□□□ -0.13
SNAPC3-205ENST00000467062 VSTM5A8MXK1 200 aa14.27□□□□□ -0.13
SNAPC3-205ENST00000467062 CNTFRP26992 372 aa14.27□□□□□ -0.13
SNAPC3-205ENST00000467062 HERV-K104P63124 156 aa14.27□□□□□ -0.13
SNAPC3-205ENST00000467062 IGFBPL1Q8WX77 278 aa14.27□□□□□ -0.13
SNAPC3-205ENST00000467062 SPTBN4Q9H254 2564 aa14.26□□□□□ -0.13
SNAPC3-205ENST00000467062 TRBV25-1A0A075B6N4 114 aa14.26□□□□□ -0.13
SNAPC3-205ENST00000467062 TAL2Q16559 108 aa14.26□□□□□ -0.13
SNAPC3-205ENST00000467062 C12orf74Q32Q52 190 aa14.26□□□□□ -0.13
SNAPC3-205ENST00000467062 OR4C13Q8NGP0 309 aa14.26□□□□□ -0.13
SNAPC3-205ENST00000467062 C8orf46Q8TAG6 207 aa14.26□□□□□ -0.13
SNAPC3-205ENST00000467062 ARMS2P0C7Q2 107 aa14.26□□□□□ -0.13
SNAPC3-205ENST00000467062 ERHP84090 104 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms