RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 GYPBP06028 91 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 LGALS3P17931 250 aaKnown RBP4.23□□□□□ -1.73
LRCH3-212ENST00000466845 PMCHL1Q16048 86 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 IGFBP7Q16270 282 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 ETDBQ3ZM63 59 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 WDR38Q5JTN6 314 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 GFRALQ6UXV0 394 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 TMEM105Q8N8V8 129 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 ZNF555Q8NEP9 628 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 FGF13Q92913 245 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 PYGO2Q9BRQ0 406 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 CXCL16Q9H2A7 254 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 PRO0461Q9UI25 63 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 HHLA3Q9XRX5 114 aa4.23□□□□□ -1.73
LRCH3-212ENST00000466845 F11RQ9Y624 299 aaKnown RBP4.23□□□□□ -1.73
LRCH3-212ENST00000466845 PDCD11Q14690 1871 aaKnown RBP4.23□□□□□ -1.73
LRCH3-212ENST00000466845 IGLV9-49A0A0B4J1Y8 123 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 IGKV1-8A0A0C4DH67 115 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 TRBV7-7A0A0K0K1E9 115 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 FAM24AA6NFZ4 105 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 SYS1-DBNDD2H3BUS1 97 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 H3BUT2 72 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 TMEM256-PLSCR3K7ERE1 68 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 NDUFB3O43676 98 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 ZNF737O75373 536 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 TCL1BO95988 128 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 ZNF688P0C7X2 276 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 ZNF883P0CG24 379 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 DAPP51397 102 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 SNRPD3P62318 126 aaKnown RBP4.22□□□□□ -1.73
LRCH3-212ENST00000466845 RPS21P63220 83 aaKnown RBP4.22□□□□□ -1.73
LRCH3-212ENST00000466845 MLF2Q15773 248 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-212ENST00000466845 PYDC2Q56P42 97 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 LGALS9CQ6DKI2 356 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 C11orf71Q6IPW1 123 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
LRCH3-212ENST00000466845 OR8A1Q8NGG7 326 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 PGLYRP2Q96PD5 576 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 PMCHL2Q9BQD1 86 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 TNFRSF19Q9NS68 423 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 RAI1Q7Z5J4 1906 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-212ENST00000466845 NOTCH4Q99466 2003 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 C5orf42Q9H799 3197 aa4.22□□□□□ -1.73
LRCH3-212ENST00000466845 IGKV1-27A0A075B6S5 117 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 TRAV9-2A0A087WT02 112 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 A0A0D9SEW6 157 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 A0A0G2JND7 137 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 KANTRA0A1W2PQU2 76 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 SOD1P00441 154 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 FRMD6-AS1P0C7T7 363 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 COX6A1P12074 109 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 VDAC1P21796 283 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 NCBP2P52298 156 aaKnown RBP eCLIP4.21□□□□□ -1.74
LRCH3-212ENST00000466845 NPC2P61916 151 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 NMSQ5H8A3 153 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF322Q6U7Q0 402 aaPredicted RBP4.21□□□□□ -1.74
LRCH3-212ENST00000466845 FP248Q71RG6 208 aaPredicted RBP4.21□□□□□ -1.74
LRCH3-212ENST00000466845 SH2D6Q7Z4S9 175 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 MARCH3Q86UD3 253 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 DEFB107AQ8IZN7 70 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 C10orf105Q8TEF2 133 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 H1FXQ92522 213 aaKnown RBP4.21□□□□□ -1.74
LRCH3-212ENST00000466845 POLR2J2Q9GZM3 115 aaKnown RBP4.21□□□□□ -1.74
LRCH3-212ENST00000466845 DOCK8Q8NF50 2099 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 MIA3Q5JRA6 1907 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 TSC2P49815 1807 aa4.21□□□□□ -1.74
LRCH3-212ENST00000466845 ATG2BQ96BY7 2078 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 TRAV1-1A0A0B4J248 108 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 IGHV1-69DA0A0B4J2H0 117 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 UMAD1C9J7I0 102 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 INS-IGF2F8WCM5 200 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 CREBL2O60519 120 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-212ENST00000466845 IL5P05113 134 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 COL8A2P25067 703 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 FCGR2CP31995 323 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 INPP1P49441 399 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 CRYBA2P53672 197 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 TAS2R19P59542 299 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 HBBP68871 147 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 ORMDL2Q53FV1 153 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 FAM78AQ5JUQ0 283 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 COMMD6Q7Z4G1 85 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 SPATA12Q7Z6I5 190 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF329Q86UD4 541 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 OR5H2Q8NGV7 314 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 FAM213BQ8TBF2 198 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 LINC00479Q96M42 142 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 TIMM17AQ99595 171 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 HDHD3Q9BSH5 251 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-212ENST00000466845 CHCHD5Q9BSY4 110 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 DPH3P1Q9H4G8 78 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 PLEKHF2Q9H8W4 249 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 LINC00588Q9Y4M8 146 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 CACNA1HO95180 2353 aa4.2□□□□□ -1.74
LRCH3-212ENST00000466845 NAP1L6A6NFF2 107 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 SNRPGP15A8MWD9 76 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 SSSCA1O60232 199 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 OR1I1O60431 355 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 IGKV1-5P01602 117 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms