RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 KRTAP10-2P60368 255 aa11.92□□□□□ -0.5
CYTH3-205ENST00000466543 C4orf46Q504U0 113 aa11.92□□□□□ -0.5
CYTH3-205ENST00000466543 SPATA12Q7Z6I5 190 aa11.92□□□□□ -0.5
CYTH3-205ENST00000466543 RXFP4Q8TDU9 374 aa11.92□□□□□ -0.5
CYTH3-205ENST00000466543 C20orf144Q9BQM9 153 aa11.92□□□□□ -0.5
CYTH3-205ENST00000466543 NAP1L6A6NFF2 107 aa11.91□□□□□ -0.5
CYTH3-205ENST00000466543 CCSO14618 274 aa11.91□□□□□ -0.5
CYTH3-205ENST00000466543 COX7A2P2O60397 106 aa11.91□□□□□ -0.5
CYTH3-205ENST00000466543 M6PRP20645 277 aa11.91□□□□□ -0.5
CYTH3-205ENST00000466543 SPANXN2Q5MJ10 180 aa11.91□□□□□ -0.5
CYTH3-205ENST00000466543 PXDC1Q5TGL8 231 aa11.91□□□□□ -0.5
CYTH3-205ENST00000466543 BPIFA4PQ86YQ2 179 aa11.91□□□□□ -0.5
CYTH3-205ENST00000466543 MITD1Q8WV92 249 aa11.91□□□□□ -0.5
CYTH3-205ENST00000466543 TRAV12-3A0A0B4J271 114 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 TRIQKQ629K1 86 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 Q6ZTI0 123 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 S100A7AQ86SG5 101 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 OR10J6PQ8NGY7 276 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 GGACTQ9BVM4 153 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 Q9H3A6 140 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 TMPRSS5Q9H3S3 457 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 C11orf1Q9H5F2 150 aa11.9□□□□□ -0.5
CYTH3-205ENST00000466543 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
CYTH3-205ENST00000466543 MIC13Q5XKP0 118 aa11.89□□□□□ -0.51
CYTH3-205ENST00000466543 ZNF431Q8TF32 576 aaPredicted RBP11.89□□□□□ -0.51
CYTH3-205ENST00000466543 ZNF503Q96F45 646 aa11.89□□□□□ -0.51
CYTH3-205ENST00000466543 UPK3BQ9BT76 320 aa11.89□□□□□ -0.51
CYTH3-205ENST00000466543 NPIPB6E9PJ23 425 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 RLN2P04090 185 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 INPP1P49441 399 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 NRARPQ7Z6K4 114 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 CCDC28AQ8IWP9 274 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 VSIG2Q96IQ7 327 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 ZNF586Q9NXT0 402 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 RNF24Q9Y225 148 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 PXMP4Q9Y6I8 212 aa11.88□□□□□ -0.51
CYTH3-205ENST00000466543 M0R3E3 92 aa11.87□□□□□ -0.51
CYTH3-205ENST00000466543 CST7O76096 145 aa11.87□□□□□ -0.51
CYTH3-205ENST00000466543 CAMLGP49069 296 aa11.87□□□□□ -0.51
CYTH3-205ENST00000466543 Q8N1X5 172 aa11.87□□□□□ -0.51
CYTH3-205ENST00000466543 DNAJC4Q9NNZ3 241 aa11.87□□□□□ -0.51
CYTH3-205ENST00000466543 MRPS16Q9Y3D3 137 aaKnown RBP11.87□□□□□ -0.51
CYTH3-205ENST00000466543 FAM24AA6NFZ4 105 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 SNURFLB1AK76 121 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 IL7P13232 177 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 DAZ2Q13117 558 aaKnown RBP11.86□□□□□ -0.51
CYTH3-205ENST00000466543 ERCC8Q13216 396 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 TTC32Q5I0X7 151 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 C11orf72Q8NBR9 251 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 ODF3Q96PU9 254 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 GSN-AS1Q9NRJ2 163 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 WDR83OSQ9Y284 106 aa11.86□□□□□ -0.51
CYTH3-205ENST00000466543 LSM5Q9Y4Y9 91 aaKnown RBP11.86□□□□□ -0.51
CYTH3-205ENST00000466543 A0A096LPF7 62 aa11.85□□□□□ -0.51
CYTH3-205ENST00000466543 H3BNG1 76 aa11.85□□□□□ -0.51
CYTH3-205ENST00000466543 PLA2G10O15496 165 aa11.85□□□□□ -0.51
CYTH3-205ENST00000466543 LEPP41159 167 aa11.85□□□□□ -0.51
CYTH3-205ENST00000466543 CD300CQ08708 224 aa11.85□□□□□ -0.51
CYTH3-205ENST00000466543 Q6ZRN7 208 aaPredicted RBP11.85□□□□□ -0.51
CYTH3-205ENST00000466543 PYGO2Q9BRQ0 406 aa11.85□□□□□ -0.51
CYTH3-205ENST00000466543 C20orf85Q9H1P6 137 aa11.85□□□□□ -0.51
CYTH3-205ENST00000466543 SCRT2Q9NQ03 307 aa11.85□□□□□ -0.51
CYTH3-205ENST00000466543 NDUFB4O95168 129 aa11.84□□□□□ -0.51
CYTH3-205ENST00000466543 BTN1A1Q13410 526 aa11.84□□□□□ -0.51
CYTH3-205ENST00000466543 VWC2Q2TAL6 325 aa11.84□□□□□ -0.51
CYTH3-205ENST00000466543 Q6ZQT7 251 aa11.84□□□□□ -0.51
CYTH3-205ENST00000466543 FAM19A4Q96LR4 140 aa11.84□□□□□ -0.51
CYTH3-205ENST00000466543 L7N2F9 121 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 ZNF324O75467 553 aaPredicted RBP11.83□□□□□ -0.52
CYTH3-205ENST00000466543 BTF3P20290 206 aaKnown RBP11.83□□□□□ -0.52
CYTH3-205ENST00000466543 FUSP35637 526 aaKnown RBP eCLIP11.83□□□□□ -0.52
CYTH3-205ENST00000466543 BCAP31P51572 246 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 CAV2P51636 162 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 LINC00315P59091 139 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 VAMP2P63027 116 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 GUK1Q16774 197 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 SEC22CQ9BRL7 303 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 KLF12Q9Y4X4 402 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 HERC1Q15751 4861 aa11.83□□□□□ -0.52
CYTH3-205ENST00000466543 TRBV19A0A075B6N1 114 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 UBE2L5PA0A1B0GUS4 154 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 IGSF23A1L1A6 192 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 C7orf71A4D174 169 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 CENPXA8MT69 81 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 FAM25EA8MYX2 175 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 KLLNB2CW77 178 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 PYYP10082 97 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 PRR9Q5T870 116 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 Q6ZRG5 221 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 AGPAT4-IT1Q9H0P7 198 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 SLC39A9Q9NUM3 307 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 UQCC1Q9NVA1 299 aa11.82□□□□□ -0.52
CYTH3-205ENST00000466543 TRAV6A0A075B6T7 132 aa11.81□□□□□ -0.52
CYTH3-205ENST00000466543 ZNF253O75346 499 aa11.81□□□□□ -0.52
CYTH3-205ENST00000466543 SLC25A5P05141 298 aaKnown RBP11.81□□□□□ -0.52
CYTH3-205ENST00000466543 RPL29P47914 159 aaKnown RBP11.81□□□□□ -0.52
CYTH3-205ENST00000466543 GCSAMLQ5JQS6 135 aa11.81□□□□□ -0.52
CYTH3-205ENST00000466543 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
CYTH3-205ENST00000466543 OR1L4Q8NGR5 311 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms