RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MYLKQ15746 1914 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 IGKV1D-42A0A075B6H8 117 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 TRAV13-1A0A0B4J241 112 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 C7orf71A4D174 169 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 ARL14EPLP0DKL9 152 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 FABP2P12104 132 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 ZNF93P35789 620 aaPredicted RBP1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 FOXA3P55318 350 aaPredicted RBP1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 NDUFA6P56556 154 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 ROMO1P60602 79 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 RRAS2P62070 204 aaPredicted RBP1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 RPS25P62851 125 aaKnown RBP1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 QRFPP83859 136 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 KHDC3LQ587J8 217 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 SPANXN5Q5MJ07 72 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 LINC00471Q8N535 108 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 MORN4Q8NDC4 146 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 OR5A2Q8NGI9 324 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 OR4K15Q8NH41 348 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 BRK1Q8WUW1 75 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 GGACTQ9BVM4 153 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 SMIM3Q9BZL3 60 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 LPAR5Q9H1C0 372 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 TCEAL2Q9H3H9 227 aaPredicted RBP1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 COL1A1P02452 1464 aaPredicted RBP1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 MBD5Q9P267 1494 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 MYOM3Q5VTT5 1437 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 KIDINS220Q9ULH0 1771 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 ADGRB1O14514 1584 aa1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 MYH1P12882 1939 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 COL24A1Q17RW2 1714 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 POLEQ07864 2286 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 GRIN2AQ12879 1464 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 IGKV3D-7A0A0C4DH55 119 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 IGKV3OR2-268A0A0C4DH90 116 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 H3BMG7 143 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 OR1I1O60431 355 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 APOC1P02654 83 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 RAB5CP51148 216 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 C10orf55Q5SWW7 151 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 TSTD1Q8NFU3 115 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 OR4S1Q8NGB4 309 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 LINC00470Q9BZP3 86 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 BCL2L10Q9HD36 194 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 CALML5Q9NZT1 146 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 TNFSF18Q9UNG2 199 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 KDM6AO15550 1401 aaPredicted RBP1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 KIAA1107Q9UPP5 1409 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 SMARCA2P51531 1590 aa1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 ROCK2O75116 1388 aaKnown RBP1.46□□□□□ -2.18
CDC42BPA-211ENST00000466538 MICAL3Q7RTP6 2002 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 MYH13Q9UKX3 1938 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 IGKV2-40A0A087WW87 121 aaPredicted RBP1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 A8MWV9 139 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 RER1O15258 196 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 IGKV2D-40P01614 121 aaPredicted RBP1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 ANGP03950 147 aaKnown RBP1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 TCRAP04437 139 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 SLC25A5P05141 298 aaKnown RBP1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 PAEPP09466 180 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 CCL4P13236 92 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 IL9P15248 144 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 CRYGSP22914 178 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 S100A1P23297 94 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 NCS1P62166 190 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 MYL5Q02045 173 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 C4orf22Q6V702 233 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 Q6ZSA8 131 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 Q8N2B8 174 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 Q8N814 137 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 SOX21Q9Y651 276 aaPredicted RBP1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 DISP2A7MBM2 1401 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 OTOGLQ3ZCN5 2332 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 QRICH2Q9H0J4 1663 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 KIF13AQ9H1H9 1805 aa1.45□□□□□ -2.18
CDC42BPA-211ENST00000466538 IGKV2D-26A0A0A0MRZ7 120 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 FAM236AA0A1B0GUQ0 79 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 FAM236BA0A1B0GV22 79 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 GNG7O60262 68 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 TIMM17BO60830 172 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 NCR2O95944 276 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 AKR1D1P51857 326 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 ZNF846Q147U1 533 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 ESRGQ1W209 222 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 EIF5AL1Q6IS14 154 aaKnown RBP1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 HAGHLQ6PII5 290 aaPredicted RBP1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 PSMF1Q92530 271 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 PRELID3AQ96N28 172 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 ZNF714Q96N38 554 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 SDF2Q99470 211 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 RETNLBQ9BQ08 111 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 NHP2Q9NX24 153 aaKnown RBP1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 KIAA1549Q9HCM3 1950 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 FAM135AQ9P2D6 1515 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 TMEM2Q9UHN6 1383 aa1.44□□□□□ -2.18
CDC42BPA-211ENST00000466538 EIF4G3O43432 1585 aaKnown RBP1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 TRAV3A0A0B4J244 114 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 LOC100130705A0A1B0GUX0 176 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 C9orf170A2RU37 121 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms