RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 FAM3BP58499 235 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-205ENST00000465950 LINC01006Q8NI28 216 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 OVOL2Q9BRP0 275 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 BDP1A6H8Y1 2624 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 A0A087X0M5 115 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 A0A1B0GX30 115 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 GAGE12JA6NER3 117 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 KNCNA6PVL3 124 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 ZNF134P52741 427 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 GAGE1Q13065 139 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 GAGE4Q13068 117 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 GAGE5Q13069 117 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 GAGE13Q4V321 117 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 AURKAIP1Q9NWT8 199 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-205ENST00000465950 DEFB131BA0A096LNP1 70 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 CENPWQ5EE01 88 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 LAMTOR2Q9Y2Q5 125 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 POLR3KQ9Y2Y1 108 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-205ENST00000465950 ARID1AO14497 2285 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 TFF1P04155 84 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 GYPEP15421 78 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 SPTAN1Q13813 2472 aaKnown RBP7.44□□□□□ -1.22
SCAF11-205ENST00000465950 DEFB135Q30KP9 77 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 TMEM136Q6ZRR5 245 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 TP53BP1Q12888 1972 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-205ENST00000465950 H3BVH4 76 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 ANGP03950 147 aaKnown RBP7.43□□□□□ -1.22
SCAF11-205ENST00000465950 ARL6IP6Q8N6S5 226 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 PLEKHB2Q96CS7 222 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 GRIFINA4D1Z8 144 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 BLCAPP62952 87 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 ZC2HC1AQ96GY0 325 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 MS4A6AQ9H2W1 248 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 IGKV1-27A0A075B6S5 117 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 LINC00158P58513 81 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 LY6G5BQ8NDX9 201 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 NYNRINQ9P2P1 1898 aaKnown RBP7.43□□□□□ -1.22
SCAF11-205ENST00000465950 HEATR1Q9H583 2144 aaKnown RBP7.43□□□□□ -1.22
SCAF11-205ENST00000465950 IGKV1D-13A0A0B4J2D9 117 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 C7orf77A4D0Y5 90 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 PHOX2AO14813 284 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 TRGC2P03986 189 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 IGKV1-13P0DP09 117 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 SNRPEP62304 92 aaKnown RBP7.43□□□□□ -1.22
SCAF11-205ENST00000465950 MIR17HGQ75NE6 70 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 IGF1P05019 195 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 BATFQ16520 125 aa7.43□□□□□ -1.22
SCAF11-205ENST00000465950 A6NDN8 102 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 RPP25LQ8N5L8 163 aaKnown RBP7.42□□□□□ -1.22
SCAF11-205ENST00000465950 ZGRF1Q86YA3 2104 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 IGHV7-81A0A0B4J1V7 117 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 TIRAPP58753 221 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 CCL20P78556 96 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 CD300EQ496F6 205 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-205ENST00000465950 Q8N9W7 124 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 PRR13Q9NZ81 148 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 RBAKDNA6NC62 111 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 FABP4P15090 132 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 KLF5Q13887 457 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-205ENST00000465950 BCL6BQ8N143 479 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-205ENST00000465950 VAMP8Q9BV40 100 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 SCRT1Q9BWW7 348 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 TMEM126AQ9H061 195 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 WIPF3A6NGB9 483 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 H3BMM0 161 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 ID3Q02535 119 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 DEFB136Q30KP8 78 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 MRPL36Q9P0J6 103 aaKnown RBP7.42□□□□□ -1.22
SCAF11-205ENST00000465950 LY96Q9Y6Y9 160 aa7.42□□□□□ -1.22
SCAF11-205ENST00000465950 LINC00469Q8N7U9 141 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 PLNP26678 52 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 C1orf159Q96HA4 380 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 PMCHL2Q9BQD1 86 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 PRO0255Q9UI72 69 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 DUX4L9Q6RFH8 374 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-205ENST00000465950 NOP10Q9NPE3 64 aaKnown RBP7.41□□□□□ -1.22
SCAF11-205ENST00000465950 TSPAN13O95857 204 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 SNRPCP09234 159 aaKnown RBP7.41□□□□□ -1.22
SCAF11-205ENST00000465950 CFPP27918 469 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-205ENST00000465950 ADAMTSL5Q6ZMM2 481 aa7.41□□□□□ -1.22
SCAF11-205ENST00000465950 NBASA2RRP1 2371 aa7.4□□□□□ -1.22
SCAF11-205ENST00000465950 ALPK2Q86TB3 2170 aa7.4□□□□□ -1.22
SCAF11-205ENST00000465950 C15orf65H3BRN8 121 aa7.4□□□□□ -1.22
SCAF11-205ENST00000465950 ZNF880Q6PDB4 577 aa7.4□□□□□ -1.22
SCAF11-205ENST00000465950 ATP5L2Q7Z4Y8 100 aa7.4□□□□□ -1.22
SCAF11-205ENST00000465950 PUSL1Q8N0Z8 303 aaKnown RBP7.4□□□□□ -1.22
SCAF11-205ENST00000465950 UBE2WQ96B02 151 aa7.4□□□□□ -1.22
SCAF11-205ENST00000465950 POLEQ07864 2286 aa7.4□□□□□ -1.22
SCAF11-205ENST00000465950 ODF3BA8MYP8 253 aa7.4□□□□□ -1.23
SCAF11-205ENST00000465950 NDUFA3O95167 84 aa7.4□□□□□ -1.23
SCAF11-205ENST00000465950 Q9HAA7 133 aa7.4□□□□□ -1.23
SCAF11-205ENST00000465950 HEATR5BQ9P2D3 2071 aa7.4□□□□□ -1.23
SCAF11-205ENST00000465950 FANCMQ8IYD8 2048 aa7.4□□□□□ -1.23
SCAF11-205ENST00000465950 C2orf16Q68DN1 1984 aa7.39□□□□□ -1.23
SCAF11-205ENST00000465950 ANAPC1Q9H1A4 1944 aa7.39□□□□□ -1.23
SCAF11-205ENST00000465950 TCRAP04437 139 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms