RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 SPRY2O43597 315 aa8.08□□□□□ -1.12
NPHP3-203ENST00000465756 TSPOP30536 169 aa8.08□□□□□ -1.12
NPHP3-203ENST00000465756 Q8N1Y9 231 aa8.08□□□□□ -1.12
NPHP3-203ENST00000465756 MAP6D1Q9H9H5 199 aa8.08□□□□□ -1.12
NPHP3-203ENST00000465756 IZUMO1RA6ND01 250 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 FAM24AA6NFZ4 105 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 K7EQG2 157 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 RPL35AP18077 110 aaKnown RBP8.07□□□□□ -1.12
NPHP3-203ENST00000465756 MLANAQ16655 118 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 GLMPQ8WWB7 406 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 NIPSNAP3BQ9BS92 247 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 U3KQE9 123 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 PLP1P60201 277 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 KHDC3LQ587J8 217 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 PSMG4Q5JS54 123 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 UBE2L5PA0A1B0GUS4 154 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 CST7O76096 145 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 MRPL32Q9BYC8 188 aaKnown RBP8.07□□□□□ -1.12
NPHP3-203ENST00000465756 AAMDCQ9H7C9 122 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 DNAJC4Q9NNZ3 241 aa8.07□□□□□ -1.12
NPHP3-203ENST00000465756 TGIF2-C20orf24A0A0A6YYL0 155 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 PRSS47A8MTI9 375 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 BUB3O43684 328 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 KRTDAPP60985 99 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 NHLH2Q02577 135 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 FOXI2Q6ZQN5 318 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 GNG13Q9P2W3 67 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 WDR83OSQ9Y284 106 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 SPINK4O60575 86 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 LYL1P12980 280 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 CSN1S1P47710 185 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 TM2D3Q9BRN9 247 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 NTF3P20783 257 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 RPUSD4Q96CM3 377 aaKnown RBP8.06□□□□□ -1.12
NPHP3-203ENST00000465756 RSG1Q9BU20 258 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 ARV1Q9H2C2 271 aa8.06□□□□□ -1.12
NPHP3-203ENST00000465756 XKRY2A2RUG3 117 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 ADCYAP1P18509 176 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 PSG9Q00887 426 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 ACOT6Q3I5F7 207 aaPredicted RBP8.05□□□□□ -1.12
NPHP3-203ENST00000465756 ADAMTSL5Q6ZMM2 481 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 C15orf54Q8N8G6 183 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 TIMM9Q9Y5J7 89 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 CA1P00915 261 aaPredicted RBP8.05□□□□□ -1.12
NPHP3-203ENST00000465756 RPL12P30050 165 aaKnown RBP8.05□□□□□ -1.12
NPHP3-203ENST00000465756 FAM90A2PQ658T7 463 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 ZNF738Q8NE65 137 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 TVP23CQ96ET8 276 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 ATP5SQ99766 215 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 TMEM208Q9BTX3 173 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 KLK5Q9Y337 293 aaPredicted RBP8.05□□□□□ -1.12
NPHP3-203ENST00000465756 TCTAP57738 103 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 EWSR1Q01844 656 aaKnown RBP eCLIP8.05□□□□□ -1.12
NPHP3-203ENST00000465756 AP1S3Q96PC3 154 aa8.05□□□□□ -1.12
NPHP3-203ENST00000465756 A0A1W2PPV4 95 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 TMEM189A5PLL7 270 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 JTBO76095 146 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 ZNF90Q03938 601 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 OR10J6PQ8NGY7 276 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 SLC25A39Q9BZJ4 359 aaPredicted RBP8.04□□□□□ -1.12
NPHP3-203ENST00000465756 SLC39A9Q9NUM3 307 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 H3BRN7 92 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 HIST1H1EP10412 219 aaKnown RBP8.04□□□□□ -1.12
NPHP3-203ENST00000465756 SBSPONQ8IVN8 264 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 OR5C1Q8NGR4 320 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 TMEM170AQ8WVE7 144 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 ZNF414Q96IQ9 312 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 FAM210BQ96KR6 192 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 MRPL36Q9P0J6 103 aaKnown RBP8.04□□□□□ -1.12
NPHP3-203ENST00000465756 C5orf52A6NGY3 159 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 RHOBP62745 196 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 SEC11CQ9BY50 192 aa8.04□□□□□ -1.12
NPHP3-203ENST00000465756 CDC34P49427 236 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-203ENST00000465756 ODF3L2Q3SX64 289 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 ACTL10Q5JWF8 245 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 HINT1P49773 126 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-203ENST00000465756 BAGE3Q86Y29 109 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 BAGE2Q86Y30 109 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 OR4B1Q8NGF8 309 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 MUC7Q8TAX7 377 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 GNPNAT1Q96EK6 184 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-203ENST00000465756 RARRES2Q99969 163 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 DPPA3Q6W0C5 159 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 LINC00305Q7Z4B0 112 aa8.03□□□□□ -1.12
NPHP3-203ENST00000465756 COLCA2A8K830 154 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 HMSDA8MTL9 139 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 TRGC1P0CF51 173 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 PAX9P55771 341 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 ATOH7Q8N100 152 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 OR2G3Q8NGZ4 309 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 SMIM9A6NGZ8 99 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 TAAR5O14804 337 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 UQCC3Q6UW78 93 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 Q6ZVH6 145 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 PHYHIPLQ96FC7 376 aa8.02□□□□□ -1.13
NPHP3-203ENST00000465756 HNRNPA3P51991 378 aaKnown RBP8.02□□□□□ -1.13
NPHP3-203ENST00000465756 CLUHP3Q96NS8 147 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms