RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 FAM222AQ5U5X8 452 aa8.74□□□□□ -1.01
XRN1-204ENST00000465074 PARD6GQ9BYG4 376 aaPredicted RBP8.74□□□□□ -1.01
XRN1-204ENST00000465074 ZNF586Q9NXT0 402 aa8.74□□□□□ -1.01
XRN1-204ENST00000465074 YTHDF2Q9Y5A9 579 aaKnown RBP8.74□□□□□ -1.01
XRN1-204ENST00000465074 ALMS1Q8TCU4 4167 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 IGHV4-4A0A075B6R2 117 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 A8MTW9 85 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 CRXO43186 299 aaPredicted RBP8.73□□□□□ -1.01
XRN1-204ENST00000465074 RPL12P30050 165 aaKnown RBP8.73□□□□□ -1.01
XRN1-204ENST00000465074 GUK1Q16774 197 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 MIR17HGQ75NE6 70 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 RPP25LQ8N5L8 163 aaKnown RBP8.73□□□□□ -1.01
XRN1-204ENST00000465074 SCGB1C1Q8TD33 95 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 SAT2Q96F10 170 aaPredicted RBP8.73□□□□□ -1.01
XRN1-204ENST00000465074 NIPSNAP3BQ9BS92 247 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 MBD2Q9UBB5 411 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 HSPB11Q9Y547 144 aa8.73□□□□□ -1.01
XRN1-204ENST00000465074 C17orf112F2Z3M2 114 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 IFNA5P01569 189 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 DAD1P61803 113 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 LGALS9CQ6DKI2 356 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 CHAC2Q8WUX2 184 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 ATP5SQ99766 215 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 WDR61Q9GZS3 305 aaKnown RBP8.72□□□□□ -1.01
XRN1-204ENST00000465074 MED28Q9H204 178 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 KCNIP2Q9NS61 270 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 DKK2Q9UBU2 259 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
XRN1-204ENST00000465074 PTTG1O95997 202 aa8.71□□□□□ -1.02
XRN1-204ENST00000465074 HIST1H1EP10412 219 aaKnown RBP8.71□□□□□ -1.02
XRN1-204ENST00000465074 AZU1P20160 251 aa8.71□□□□□ -1.02
XRN1-204ENST00000465074 CDKN1BP46527 198 aa8.71□□□□□ -1.02
XRN1-204ENST00000465074 TCTAP57738 103 aa8.71□□□□□ -1.02
XRN1-204ENST00000465074 FFAR4Q5NUL3 377 aa8.71□□□□□ -1.02
XRN1-204ENST00000465074 EXOC3-AS1Q8N2X6 119 aa8.71□□□□□ -1.02
XRN1-204ENST00000465074 SLC25A2Q9BXI2 301 aa8.71□□□□□ -1.02
XRN1-204ENST00000465074 RYR2Q92736 4967 aa8.71□□□□□ -1.02
XRN1-204ENST00000465074 TRBV19A0A075B6N1 114 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 M0R3E3 92 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 OR7C2O60412 319 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 OR10J4P0C629 311 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 DEFB130BP0DP73 79 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 DEFB130AP0DP74 79 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 TSPOP30536 169 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 ERCC8Q13216 396 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 ICAM4Q14773 271 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 KIR3DS1Q14943 382 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 FCN2Q15485 313 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 FAM122CQ6P4D5 195 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 NDUFAF3Q9BU61 184 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 OR51M1Q9H341 326 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 AAMDCQ9H7C9 122 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 TMEM14CQ9P0S9 112 aa8.7□□□□□ -1.02
XRN1-204ENST00000465074 PLECQ15149 4684 aaKnown RBP8.7□□□□□ -1.02
XRN1-204ENST00000465074 DNAH1Q9P2D7 4330 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 TRAV12-3A0A0B4J271 114 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 TEX48A0A1B0GUV7 120 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 EIF3GO75821 320 aaKnown RBP eCLIP8.69□□□□□ -1.02
XRN1-204ENST00000465074 NBEAP1P0C6P0 100 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 LEPP41159 167 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 TMEM256Q8N2U0 113 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 PAXXQ9BUH6 204 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 FUT9Q9Y231 359 aa8.69□□□□□ -1.02
XRN1-204ENST00000465074 NDUFB4O95168 129 aa8.68□□□□□ -1.02
XRN1-204ENST00000465074 TAS2R60P59551 318 aa8.68□□□□□ -1.02
XRN1-204ENST00000465074 GFI1BQ5VTD9 330 aa8.68□□□□□ -1.02
XRN1-204ENST00000465074 RNF141Q8WVD5 230 aa8.68□□□□□ -1.02
XRN1-204ENST00000465074 FAM167A-AS1Q96KT0 104 aa8.68□□□□□ -1.02
XRN1-204ENST00000465074 MRPL32Q9BYC8 188 aaKnown RBP8.68□□□□□ -1.02
XRN1-204ENST00000465074 WFDC1Q9HC57 220 aa8.68□□□□□ -1.02
XRN1-204ENST00000465074 IGKV2-40A0A087WW87 121 aaPredicted RBP8.67□□□□□ -1.02
XRN1-204ENST00000465074 NPIPB6E9PJ23 425 aa8.67□□□□□ -1.02
XRN1-204ENST00000465074 ZNF253O75346 499 aa8.67□□□□□ -1.02
XRN1-204ENST00000465074 IGKV2D-40P01614 121 aaPredicted RBP8.67□□□□□ -1.02
XRN1-204ENST00000465074 RANP62826 216 aaKnown RBP8.67□□□□□ -1.02
XRN1-204ENST00000465074 CCDC28AQ8IWP9 274 aa8.67□□□□□ -1.02
XRN1-204ENST00000465074 PRELID1Q9Y255 219 aa8.67□□□□□ -1.02
XRN1-204ENST00000465074 H7BYZ3 331 aa8.66□□□□□ -1.02
XRN1-204ENST00000465074 RNASE4P34096 147 aaKnown RBP8.66□□□□□ -1.02
XRN1-204ENST00000465074 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
XRN1-204ENST00000465074 PDE6HQ13956 83 aa8.66□□□□□ -1.02
XRN1-204ENST00000465074 UBE2DNLQ8IWF7 75 aa8.66□□□□□ -1.02
XRN1-204ENST00000465074 FXYD5Q96DB9 178 aa8.66□□□□□ -1.02
XRN1-204ENST00000465074 PHYHIPLQ96FC7 376 aa8.66□□□□□ -1.02
XRN1-204ENST00000465074 C16orf74Q96GX8 76 aa8.66□□□□□ -1.02
XRN1-204ENST00000465074 HYLS1Q96M11 299 aa8.66□□□□□ -1.02
XRN1-204ENST00000465074 AGPAT4-IT1Q9H0P7 198 aa8.66□□□□□ -1.02
XRN1-204ENST00000465074 NOP10Q9NPE3 64 aaKnown RBP8.66□□□□□ -1.02
XRN1-204ENST00000465074 A0A1W2PPV4 95 aa8.65□□□□□ -1.02
XRN1-204ENST00000465074 LYRM9A8MSI8 78 aa8.65□□□□□ -1.02
XRN1-204ENST00000465074 F5H768 121 aa8.65□□□□□ -1.02
XRN1-204ENST00000465074 HMGB3O15347 200 aaKnown RBP8.65□□□□□ -1.02
XRN1-204ENST00000465074 GPX1P07203 203 aa8.65□□□□□ -1.02
XRN1-204ENST00000465074 OXA1LQ15070 435 aa8.65□□□□□ -1.02
XRN1-204ENST00000465074 ACOT6Q3I5F7 207 aaPredicted RBP8.65□□□□□ -1.02
XRN1-204ENST00000465074 KHDC3LQ587J8 217 aa8.65□□□□□ -1.02
XRN1-204ENST00000465074 TMEM78Q5T7P6 136 aa8.65□□□□□ -1.02
XRN1-204ENST00000465074 TMEM88Q6PEY1 159 aa8.65□□□□□ -1.02
XRN1-204ENST00000465074 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms