RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 ZNF705EA8MWA4 302 aaPredicted RBP12.91□□□□□ -0.34
LST1-220ENST00000464526 GNG5P63218 68 aa12.91□□□□□ -0.34
LST1-220ENST00000464526 PDE6HQ13956 83 aa12.91□□□□□ -0.34
LST1-220ENST00000464526 TEX261Q6UWH6 196 aa12.91□□□□□ -0.34
LST1-220ENST00000464526 RPUSD4Q96CM3 377 aaKnown RBP12.91□□□□□ -0.34
LST1-220ENST00000464526 FAM110AQ9BQ89 295 aa12.91□□□□□ -0.34
LST1-220ENST00000464526 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
LST1-220ENST00000464526 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
LST1-220ENST00000464526 H2AFB1P0C5Y9 115 aa12.9□□□□□ -0.34
LST1-220ENST00000464526 ID1P41134 155 aa12.9□□□□□ -0.34
LST1-220ENST00000464526 EIF5AL1Q6IS14 154 aaKnown RBP12.9□□□□□ -0.34
LST1-220ENST00000464526 SAV1Q9H4B6 383 aaPredicted RBP12.9□□□□□ -0.34
LST1-220ENST00000464526 ZMAT5Q9UDW3 170 aaKnown RBP12.9□□□□□ -0.34
LST1-220ENST00000464526 ZNF253O75346 499 aa12.9□□□□□ -0.34
LST1-220ENST00000464526 IFITM2Q01629 132 aa12.9□□□□□ -0.34
LST1-220ENST00000464526 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
LST1-220ENST00000464526 LINC00322Q6ZN03 302 aaPredicted RBP12.9□□□□□ -0.34
LST1-220ENST00000464526 ZNF680Q8NEM1 530 aa12.9□□□□□ -0.34
LST1-220ENST00000464526 TGP01266 2768 aa12.89□□□□□ -0.35
LST1-220ENST00000464526 A0A0J9YX75 114 aa12.89□□□□□ -0.35
LST1-220ENST00000464526 H3BMM0 161 aa12.89□□□□□ -0.35
LST1-220ENST00000464526 TEX46H3BTG2 121 aa12.89□□□□□ -0.35
LST1-220ENST00000464526 HLA-DRB4P13762 266 aa12.89□□□□□ -0.35
LST1-220ENST00000464526 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
LST1-220ENST00000464526 RPH3ALQ9UNE2 315 aa12.89□□□□□ -0.35
LST1-220ENST00000464526 HLA-DRB4X5D2U9 266 aa12.89□□□□□ -0.35
LST1-220ENST00000464526 GIG44P09565 113 aaPredicted RBP12.88□□□□□ -0.35
LST1-220ENST00000464526 ATP5G3P48201 142 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 RAB5CP51148 216 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 CNN1P51911 297 aaKnown RBP12.88□□□□□ -0.35
LST1-220ENST00000464526 FXYD7P58549 80 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 ERCC8Q13216 396 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 TUBA4BQ9H853 241 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 PGPA6NDG6 321 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 FAM74A7A6NL05 159 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 HIST1H1AQ02539 215 aaPredicted RBP12.88□□□□□ -0.35
LST1-220ENST00000464526 FOXI2Q6ZQN5 318 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 OR8A1Q8NGG7 326 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 TMEM167BQ9NRX6 74 aa12.88□□□□□ -0.35
LST1-220ENST00000464526 PSG9Q00887 426 aa12.87□□□□□ -0.35
LST1-220ENST00000464526 SBSPONQ8IVN8 264 aa12.87□□□□□ -0.35
LST1-220ENST00000464526 OR4B1Q8NGF8 309 aa12.87□□□□□ -0.35
LST1-220ENST00000464526 VGLL1Q99990 258 aa12.87□□□□□ -0.35
LST1-220ENST00000464526 SLC35B3Q9H1N7 401 aa12.87□□□□□ -0.35
LST1-220ENST00000464526 RETNQ9HD89 108 aa12.87□□□□□ -0.35
LST1-220ENST00000464526 PAGE4O60829 102 aa12.86□□□□□ -0.35
LST1-220ENST00000464526 KIR3DS1Q14943 382 aa12.86□□□□□ -0.35
LST1-220ENST00000464526 SAMD13Q5VXD3 122 aa12.86□□□□□ -0.35
LST1-220ENST00000464526 AMTNQ6UX39 209 aa12.86□□□□□ -0.35
LST1-220ENST00000464526 STHQ8IWL8 128 aa12.86□□□□□ -0.35
LST1-220ENST00000464526 OTORQ9NRC9 128 aa12.86□□□□□ -0.35
LST1-220ENST00000464526 A8MZ25 164 aa12.85□□□□□ -0.35
LST1-220ENST00000464526 SUMO1P63165 101 aaKnown RBP12.85□□□□□ -0.35
LST1-220ENST00000464526 Q8TAT8 98 aa12.85□□□□□ -0.35
LST1-220ENST00000464526 SGK494Q96LW2 274 aa12.85□□□□□ -0.35
LST1-220ENST00000464526 AAMDCQ9H7C9 122 aa12.85□□□□□ -0.35
LST1-220ENST00000464526 GNG13Q9P2W3 67 aa12.85□□□□□ -0.35
LST1-220ENST00000464526 TRAV8-1A0A0A6YYK1 113 aa12.85□□□□□ -0.35
LST1-220ENST00000464526 CLEC5AQ9NY25 188 aa12.85□□□□□ -0.35
LST1-220ENST00000464526 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
LST1-220ENST00000464526 HAGHQ16775 308 aa12.84□□□□□ -0.35
LST1-220ENST00000464526 LOC102724200A0A096LPH7 203 aaPredicted RBP12.83□□□□□ -0.35
LST1-220ENST00000464526 DIRC3C9JPN6 131 aa12.83□□□□□ -0.35
LST1-220ENST00000464526 M0R2Z0 102 aa12.83□□□□□ -0.35
LST1-220ENST00000464526 SLC25A5P05141 298 aaKnown RBP12.83□□□□□ -0.35
LST1-220ENST00000464526 GOLT1AQ6ZVE7 132 aa12.83□□□□□ -0.35
LST1-220ENST00000464526 LINC00479Q96M42 142 aa12.83□□□□□ -0.35
LST1-220ENST00000464526 STAB2Q8WWQ8 2551 aa12.83□□□□□ -0.35
LST1-220ENST00000464526 A8MTW9 85 aa12.83□□□□□ -0.36
LST1-220ENST00000464526 NMBP08949 121 aa12.83□□□□□ -0.36
LST1-220ENST00000464526 CT45A10P0DMU9 189 aa12.83□□□□□ -0.36
LST1-220ENST00000464526 EBLN2Q6P2I7 272 aa12.83□□□□□ -0.36
LST1-220ENST00000464526 CCDC28AQ8IWP9 274 aa12.83□□□□□ -0.36
LST1-220ENST00000464526 LYPD1Q8N2G4 141 aa12.83□□□□□ -0.36
LST1-220ENST00000464526 MRPL53Q96EL3 112 aaKnown RBP12.83□□□□□ -0.36
LST1-220ENST00000464526 AGPAT4-IT1Q9H0P7 198 aa12.83□□□□□ -0.36
LST1-220ENST00000464526 A0A1W2PRE2 83 aa12.82□□□□□ -0.36
LST1-220ENST00000464526 CMC4P56277 68 aaPredicted RBP12.82□□□□□ -0.36
LST1-220ENST00000464526 SPINK13Q1W4C9 94 aa12.82□□□□□ -0.36
LST1-220ENST00000464526 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
LST1-220ENST00000464526 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
LST1-220ENST00000464526 NPIPB6E9PJ23 425 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 XCL2Q9UBD3 114 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 TRAV12-2A0A075B6T6 113 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 J3KRW8 73 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
LST1-220ENST00000464526 TCRAP04437 139 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 RBMY1A1P0DJD3 496 aaKnown RBP12.81□□□□□ -0.36
LST1-220ENST00000464526 RBMY1CP0DJD4 496 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 RBMY1FQ15415 496 aaKnown RBP12.81□□□□□ -0.36
LST1-220ENST00000464526 DEFB135Q30KP9 77 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 PRR9Q5T870 116 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 Q6ZQT7 251 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 RARRES2Q99969 163 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
LST1-220ENST00000464526 SCO2A0A1W2PP80 73 aa12.8□□□□□ -0.36
LST1-220ENST00000464526 C5orf17Q8NAS9 161 aa12.8□□□□□ -0.36
LST1-220ENST00000464526 TVP23CQ96ET8 276 aa12.8□□□□□ -0.36
LST1-220ENST00000464526 EPDR1Q9UM22 224 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms